Table 2 The number of SNPs obtained from the reference-based assembly of 78 samples of Sceloporus occidentalis from the Puget Sound Region. Allowing for more missing data (50%) results in more SNPs compared to no missing data (0%).
Chromosome | 50% missing data | 0% missing data |
|---|---|---|
chr1 | 322 | 62 |
chr2 | 291 | 60 |
chr3 | 218 | 37 |
chr4 | 223 | 48 |
chr5 | 143 | 22 |
chr6 | 170 | 35 |
chr7 | 64 | 15 |
chr8 | 51 | 13 |
chr9 | 47 | 12 |
chr10 | 8 | 2 |
chr11 | 17 | 3 |
Total SNPs | 1554 | 309 |