Table 2 Consistency of assemblies.

From: The salmon louse genome may be much larger than sequencing suggests

 

ASM18125v2

Atlantic female

Atlantic male

UVic_Lsal_1.0

UStir_LSAA

LSalAtl2S

ASM18125v2 GCA_000181255.2

 

97.74% (0.90)

96.90% (0.90)

96.17% (0.97)

97.12% (0.88)

97.50% (0.88)

Atlantic female GCA_001005205.1

93.77% (0.88)

 

97.85% (0.98)

93.67% (0.89)

97.22% (0.95)

96.97% (0.93)

Atlantic male GCA_001005235.1

94.01% (0.88)

98.90% (0.98)

 

94.06% (0.89)

97.36% (0.95)

96.99% (0.93)

UVic_Lsal_1.0 GCA_016086655.1

96.44% (0.97)

98.31% (0.91)

97.52% (0.91)

 

98.13% (0.89)

98.12% (0.89)

UStir_LSAA PRJEB43242

93.48% (0.87)

97.47% (0.97)

96.59% (0.97)

93.75% (0.88)

 

97.74% (0.95)

LSalAtl2S licebase.org

94.56% (0.89)

98.58% (0.97)

97.59% (0.97)

94.80% (0.89)

98.57% (0.96)

 
  1. The assemblies were converted to 240 bp synthetic reads that were blasted against all other assemblies. The assemblies from which synthetic reads originated are indicated in column headings and the reference assemblies are indicated in the row headings. The results show average query cover % and (the proportion of reads that maps with > 95% identity).
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