Table 2 Number of putative trehalose pathway protein sequences found in the species under study, using the EggNOG database. The defined OGs for sequences from model species and sugarcane were joined, recovering 15 OGs.

From: Bioinformatic analyses to uncover genes involved in trehalose metabolism in the polyploid sugarcane

Species

TPS class I

TPS class II

TPP

TRE

B1

B2

A1-A5

(A1, A2, A3, B1 and B2)

Arabidopsis thaliana

4

5

19

22

1

Oryza sativa

2

0

21

20

1

Triticum aestivum

18

0

24

37

3

Setaria spp

3

0

20

27

2

Sorghum bicolor

2

0

25

39

2

Miscanthus sinensis

5

0

24

31

9

Zea mays

55

0

120

26

6

Saccharum spp

39

0

211

165

29

  1. Numbers of putative protein sequences of trehalose-6-phosphate synthase (TPS)—Class I (catalytic) and II (regulatory), trehalose-6-phosphate phosphatase (TPP), and trehalase (TRE) in different plant species. The clade distribution follows the nomenclature established by15,16.
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