Table 1 Frequency of detection of seven OTUs used to predict disease status on D, HD and H feet in the period 2 + weeks before footrot occurred.
Taxonomic identification | Percentage of samples with OTU detected | |||
|---|---|---|---|---|
D feet (n = 32) | HD feet (n = 25) | H feet (n = 60) | ||
OTU_41 | Prevotella | 84 | 92 | 77 |
OTU_190 | (Tissierellales) | 84 | 96 | 40 |
OTU_69 | (Bacteroidia) | 53 | 56 | 0 |
OTU_28 | Porphyromonas | 94 | 96 | 58 |
OTU_23 | Pseudoclavibacter | 72 | 76 | 35 |
OTU_61 | Porphyromonas | 50 | 60 | 3 |
OTU_364 | (Tissierellales) | 59 | 56 | 7 |
