Table 1 Characteristics of included studies.
First author | Year | Country | Disease | Number of patients | Number of controls | HLA alleles (list of reported alleles) | HLA typing method | Genotype, Allele or haplotype frequency | Reference |
|---|---|---|---|---|---|---|---|---|---|
Dere | 2020 | Turkey | PV | 30 | 30 | DRB1*01, *03, *04, *07, *08, *11, *12, *13, *14, *15, DQB1*02, *03, *04, *05, *06 | PCR-SSP | Genotype frequency | |
Ehsan | 2015 | Iran | MuSK MG | 24 | 200 | DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *1301, *1302, *1303, *14, *15, *16, DQB1*0201, *0301, *0302, *0303, *05, *0601, *0602, *0603, *0604 DRB1*14-DQA1*0104, DQB1*05, DRB1*15-DQA1*0102-DQB1*0601, DRB1*15-DQA1*0102-DQB1*0602, DRB1*15-DQA1*0103-DQB1*0601, DRB1*16-DQA1*0102-DQB1*05 | PCR-SSP | Allele frequency, haplotype frequency | |
Alahgholi-Hajibehzad | 2013 | Turkey | MuSK MG | 48 | 250 | DRB1*03, DRB1*14, DRB1*16, DQB1*05 DRB1*14-DQB1*05, DRB1*16-DQB1*05 | PCR-SSP | Genotype frequency, haplotype frequency | |
Harfouch | 2014 | Syria | PV | 91 | 270 | DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16 | PCR-SSP | Genotype frequency | |
Gonzalez-Escribano | 1998 | Spain | PV | 26 | 200 | DR1, DR2, DR3, DR4, DR7, DR8, DR9, DR10, DR11, DR12, DR13, DR14 | PCR-SSOP, PCR-SSP | Genotype frequency | |
Brochado | 2016 | Brazil | PF | 86 (172) | 1592 (3184) | DRB1*01:01, DRB1*01:02, DRB1*04:02, DRB1*07:01, DRB1*08:04, DRB1*11:01, DRB1*13:01, DRB1*14:01, DRB1*14:04 DQB1*03:01, *03:02, *05:01, *05:03, *06:02, *06:03 DRB1*14-DQA1*01-DQB1*05, DRB1*16-DQA1*01-DQB1*05 | Commercial kits form One Lambda | Allele frequency, haplotype frequency | |
PV | 82 (164) | 1592 (3184) | DRB1*01:01, *01:02, *04:02, *07:01, *08:04, *11:01, *13:01, *14:01, *14:04 DQB1*03:01, *03:02, *05:01, *05:03, *06:02, *06:03 DRB1*15-DQA1*01-DQB1*06, DRB1*14-DQA1*01-DQB1*05, DRB1*16-DQA1*01-DQB1*05 | ||||||
Martel | 2002 | France | PF | 31 | 84 | DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16, | PCR-SSO, PCR-SSP, PCR–RFLP | Genotype frequency | |
30 | 64 | DQB1*02, *03:02, *05:03 | |||||||
Párnická | 2013 | Slovakia | PV | 43 (86) | 113 (226) | DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16 DQB1*02, *03, *04, *05, *06 DRB1*14-DQB1*05:03, DRB1*14:54-DQB1*05:03, DRB1*14:04-DQB1*05:03, DRB1*14:05-DQB1*05:03 | PCR-SSP | Allele frequency, haplotype frequency | |
Nikolic | 2014 | Serbia | MuSK MG | 31 (62) | 1992 (3984) | DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16 | PCR with sequence-specific oligonucleotides | Genotype frequency, allele frequency, haplotype frequency | |
31 (62) | 159 (318) | DQB1*02, *03, *04, *05, *06 DRB1*14-DQB1*05, DRB1*16-DQB1*05, DRB1*15-DQB1*06 | |||||||
De Sena Nogueira Maehara | 2017 | Brazil | Fogo selvagem | 42 (84) | 478 (956) | DRB1*02, *04, *05, *07, *16 | PCR-SSO | Allele frequency | |
Netherlands | PF | 17 (34) | 447 (894) | DRB1*04 | |||||
Coppo | 2010 | France | TTP | 61 | 172 | DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16 | PCR-SSO | Genotype frequency | |
60 | 172 | DQB1*02, *03, *04, *05, *06 | |||||||
Kanai | 2016 | Japan | MuSK MG | 14 | 100 | DRB1*01, *04, *08, *09, *11, *12, *13, *14, *15, 16 DQB1*03, *04, *05, *06 | PCR-SSP | Genotype frequency, haplotype frequency | |
Piccinelli | 2019 | Italy | CIDP | 24 (48) | 216 (432) | DRB1*01, *03, *04, *07, *08, *10, *11, *13, *14, *15, *16 DQB1*02, *03, *04, *05, *06 DRB1*15-DQB1*06 | PCR-SSP | Allele frequency, haplotype frequency | |
Zivanovic | 2016 | Serbia | PV | 72 (144) | 1992 (3984) | DRB1*01, *03, *04, *07, *11, *12, *13, *14, *15, *16 | PCR-SSP | Allele frequency, haplotype frequency | |
72 (144) | 159 (318) | DQB1*02, *03, *04, *05, *06 DRB1*14-DQB1*05, DRB1*16-DQB1*05, DRB1*15-DQB1*06 | |||||||
Saha | 2019 | UK | PF (Caucasian white British) | 25 (50) | 100 (200) | DRB1*01, *04, *14 DQB1*0302, *0501, *0502, *0503 | PCR-SSP | Allele frequency | |
PF (Indo-Asians) | 10 (20) | 59 (118) | DRB1*01, *04, *14 DQB1*0302, *0501, *0503 | ||||||
Gil | 2017 | Brazil | PV | 102 | 594 | DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16 DQB1*02, *03, *04, *05, *06 | PCR-SSP | Genotype frequency | |
Torzecka | 2003 | Poland | PF | 15 (30) | 152 (304) | DRB1*01, *03, *04, *07, *08, *09, *10 *11, *12, *13, *14, *15 | Dynal RELI SSO HLA-DRB Test | Allele frequency | |
PV | 38 (76) | 152 (304) | DRB1*01, *03, *04, *07, *08, *09, *10 *11, *12, *13, *14, *15 | ||||||
Abida | 2009 | Tunisia | PF | 90 (180) | 270 (540) | DRB1*03, *04, *11, *13, *15 DQB1*0301, *0302, *06 | PCR-SSP | Allele frequency | |
Ogata | 2020 | Japan | CIDP | 22 (44) | 418 (836) | DRB1*01, *03, *04, *08, *09, *10, *11, *12, *13, *14, *15, *16 DQB1*02, *03, *04, *05, *06 DRB1*14:05-DQB1*05:03, DRB1*15:01-DQB1*06:02, DRB1*15:02-DQB1*06:01 | Next-generation sequencing | Allele frequency, haplotype frequency | |
Priyadarshini | 2018 | India | PV | 50 | 50 | DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16 DQB1*02, *03, *04, *05, *06 DRB1*14-DQB1*05, DRB1*15-DQB1*06 | PCR-SSOP | Genotype frequency, haplotype frequency | |
Tunca | 2010 | Turkey | PV | 25 | 113 | DRB1*01, *03, *04, *05, *06, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16 DQB1*02, *03, *04, *05, *06 | PCR-SSP | Genotype frequency | |
Haase | 2015 | Germany | PV (German) | 46 (92) | 74 (148) | DRB1*01, *02, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16 | PCR-SSP | Allele frequency | |
PV (Egypt) | 47 (94) | 73 (146) | |||||||
Martinez-Martinez | 2017 | Spain | CIDP | 13 | 941 | DRB1*15 | DNA sequence analysis and SSP methodology | Genotype frequency, Haplotype frequency | |
13 | 35 | DRB1*15-DQB1*06 | |||||||
Glorio | 1999 | Argentina | PV | 30 | 199 | DR3, DR4, DR8, DR14, DR15 DQB1*03, *05 | PCR-SSO | Genotype frequency | |
Pavoni | 2003 | Brazil | Fogo selvagem | 128 | 402 | DRB1*01, *03, *04, 07, *08, *09, *10, *11, *12, *13, *14, *15, *16 | PCR-SSOP | Genotype frequency | |
Thomas | 1998 | Spain | PV | 26 | 200 | DR1, DR2, DR3, DR4, DR7, DR8, DR9, DR10, DR11, DR12, DR13, DR14 | PCR-SSOP, PCR-SSP | Genotype frequency | |
Zhang | 2019 | China | PF | 72 | 501 | DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16 DQB1*02, *03, *04, *05, *06 | Affymetrix axiom precision medicine research array based GWAS | Genotype frequency, allele frequency | |
PV | 255 | 501 | |||||||
Moraes | 1991 | Brazil | Fogo selvagem | 37 | 49 | DR1, DR16, DQ2 | PCR-SSP | Genotype frequency | |
38 | 46 | DRB1*15 | |||||||
38 | 41 | DQB1*06 | |||||||
Lee | 1998 | South Korea | PF | 15 | 100 | DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16 DQB1*02, *03, *04, *05, *06 | PCR-SSP | Genotype frequency | |
PV | 15 | 100 | |||||||
Shams | 2008 | Iran | PV | 52 (104) | 180 (360) | DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16 DQB1*02, *03, *04, *05, *06 DRB1*15-DQA1*01-DQB1*06 DRB1*16-DQA1*01, DQB1*05 | PCR-SSP | Allele frequency, haplotype frequency | |
Orouji | 2014 | Mid-east origin | PV | 54 | 85 | DQB1*02, *03, *04, *05, *06 | PCR-SSP | Genotype frequency, allele frequency | |
Miyagawa | 1997 | Japan | PF | 9 | 525 | DRB1*04, *14 DQB1*03, *05 DRB1*14-DQA1*01-DQB1*05 | NA | Genotype frequency, haplotype frequency | |
PV | 7 | 525 | |||||||
Joly † | 2020 | France | TTP | 26 | 172 | DRB1*04, *11 DQB1*03 | PCR-SSP | Genotype frequency, allele frequency | |
Glorio | 2002 | Argentina | PV | 47 | 199 | DR3, DR4, DR8, DR14, DR15 DQB1*03, *05 | PCR-SSO | Genotype frequency | |
Sakai | 2020 | Japan | TTP | 52 (104) | 523 (1046) | DRB1*01, *04, *08, *09, *11, *12, *13, *14, *15 DQB1*03, *04, *05, *06 | Commercial kits with Illumina MiSeq technology | Allele frequency | |
Koc | 2012 | Turkey | Pemphigus | 60 | 60 | DRB1*04, *11, *14 DQB1*02, *05, *06 | PCR-SSP | Genotype frequency | |
Scully | 2010 | UK | TTP | 50 | 200 | DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16 DQB1*02, *03, *04, *05, *06 | PCR-SSP, PCR-SSOP | Genotype frequency | |
Mobini | 1997 | Iran | PV | 38 | 57 | DRB1*14-DRB3*02-DQB1*05-DQA1*01, DRB1*15-DRB5*01-DQB1*06-DQA1*01, DRB1*15-DRB5*01-DQB1*06-DQA1*05 | PCR-SSOP | Haplotype frequency | |
Delgado | 1997 | Pakistan | PV (Pakistan) | 19 (38) | 13 (26) | DRB1*01, *02, *03, *04, *07, *10, *11, *13, *14 DQB1*02, *03, *04, *05, *06 | PCR-SSOP | Allele frequency | |
Europe | PV (Europe) | 19 (38) | 248 (496) | DRB1*01, *02, *04, *07, *08, *11, *12, *13, *14 DQB1*02, *03, *05, *06 | |||||
Yamashina | 1998 | Japan | PV | 17 | 525 | DRB1*04, *14 DQB1*03, *05 | PCR–RFLP | Genotype frequency, haplotype frequency | |
Al Haddad | 2019 | Lebanon | TTP | 30 | 30 | DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16 DQB1*02, *03, *04, *05, *06 | PCR-SSP | Genotype frequency | |
John | 2011 | Germany | TTP | 54 | 11,407 | DRB1*01, *03, *04, *07, *08 *09, *11, *12, *13, *14 | PCR-SSP, PCR-SSO | Genotype frequency | |
50 | 174 | DQB1*02 | |||||||
54 | 174 | DQB1*04, *05 | |||||||
47 | 174 | DQB1*03 | |||||||
52 | 174 | DQB1*06 | |||||||
Martino | 2016 | France | TTP | 26 (52) | 663 (1326) | DRB1*04, DRB1*11 | PCR-SSO | Allele frequency | |
26 (52) | 437 (874) | DQB1*03 | |||||||
24 (48) | 100 (200) | DRB1*04, DRB1*11 DQB1*03 | |||||||
Cerna | 1993 | Brazil | Fogo selvagem | 10 | 74 | DRB1*04, *08, *14, *16 DQB1*03, *04 | PCR-SSOP | Genotype frequency | |
Birol | 2002 | Turkey | Pemphigus | 33 | 100 | DR4, DR11, DR14 DQ2, DQ4 | Microdroplet lymphocyte test | Genotype frequency | |
Rangel-Gamboa | 2015 | Mexico | PV | 43 (86) | 99 (198) | DR1, DR4, DR7, DR8, DR11, DR13, DR14, DR16 | PCR-SSO | Allele frequency | |
Khan | 2015 | Pakistan | PV | 28 | 150 | DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16 | PCR-SSP | Genotype frequency | |
Carcassi | 1996 | Italy | PV (Sardinians) | 16 (32) | 91 (182) | DRB1*03, *04, *08, *14 DQB1*02, *03, *05 | PCR-SSO | Allele frequency | |
PV (Italians) | 16 (32) | 284 (568) | DRB1*03, *04, *08, *14 | ||||||
16 (32) | 406 (812) | DQB1*02, *03, *05 | |||||||
Lombardi | 1996 | Italy | PV | 33 | 102 | DRB1*01, *03, *04, *07, *08, *11, *13, *14, *15, *16 DQB1*02, *03, *04, *05, *06 | PCR-SSO | Genotype frequency | |
Saha | 2010 | UK | PV (white Europeans) | 96 (192) | 100 (200) | DRB1*03, *04, *07, *14, *15 DQB1*02, *03, *05, *06 | PCR-SSP | Allele frequency | |
PV (Indo-Asians) | 57 (114) | 59 (118) | |||||||
Niks | 2006 | Netherlands | MuSK MG | 23 | 2440 | DR1, DR3, DR14, DR16, DQ5, DQ6 | PCR-amplified fragments and biotin labelled oligonucleotides | Genotype frequency, Haplotype frequency | |
23 (46) | 321 (642) | DRB1*14-DQB1*05, DRB1*15-DQB1*05 | |||||||
Sinkovits | 2017 | Hungary | TTP | 75 | 204 | DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16 | PCR-SSO | Genotype frequency, Haplotype frequency | |
75 | 162 | DRB1*14-DQB1*05, DRB1*16-DQB1*05, DRB1*15-DQB1*06 |