Table 1 Characteristics of included studies.

From: A systematic review and meta-analysis of HLA class II associations in patients with IgG4 autoimmunity

First author

Year

Country

Disease

Number of patients

Number of controls

HLA alleles (list of reported alleles)

HLA typing method

Genotype, Allele or haplotype frequency

Reference

Dere

2020

Turkey

PV

30

30

DRB1*01, *03, *04, *07, *08, *11, *12, *13, *14, *15, DQB1*02, *03, *04, *05, *06

PCR-SSP

Genotype frequency

80

Ehsan

2015

Iran

MuSK MG

24

200

DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *1301, *1302, *1303, *14, *15, *16,

DQB1*0201, *0301, *0302, *0303, *05, *0601, *0602, *0603, *0604

DRB1*14-DQA1*0104, DQB1*05, DRB1*15-DQA1*0102-DQB1*0601, DRB1*15-DQA1*0102-DQB1*0602, DRB1*15-DQA1*0103-DQB1*0601, DRB1*16-DQA1*0102-DQB1*05

PCR-SSP

Allele frequency, haplotype frequency

81

Alahgholi-Hajibehzad

2013

Turkey

MuSK MG

48

250

DRB1*03, DRB1*14, DRB1*16, DQB1*05

DRB1*14-DQB1*05, DRB1*16-DQB1*05

PCR-SSP

Genotype frequency, haplotype frequency

82

Harfouch

2014

Syria

PV

91

270

DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16

PCR-SSP

Genotype frequency

83

Gonzalez-Escribano

1998

Spain

PV

26

200

DR1, DR2, DR3, DR4, DR7, DR8, DR9, DR10, DR11, DR12, DR13, DR14

PCR-SSOP, PCR-SSP

Genotype frequency

84

Brochado

2016

Brazil

PF

86 (172)

1592 (3184)

DRB1*01:01, DRB1*01:02, DRB1*04:02, DRB1*07:01, DRB1*08:04, DRB1*11:01, DRB1*13:01, DRB1*14:01, DRB1*14:04

DQB1*03:01, *03:02, *05:01, *05:03, *06:02, *06:03

DRB1*14-DQA1*01-DQB1*05, DRB1*16-DQA1*01-DQB1*05

Commercial kits form One Lambda

Allele frequency, haplotype frequency

85

PV

82 (164)

1592 (3184)

DRB1*01:01, *01:02, *04:02, *07:01, *08:04, *11:01, *13:01, *14:01, *14:04

DQB1*03:01, *03:02, *05:01, *05:03, *06:02, *06:03

DRB1*15-DQA1*01-DQB1*06, DRB1*14-DQA1*01-DQB1*05, DRB1*16-DQA1*01-DQB1*05

Martel

2002

France

PF

31

84

DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16,

PCR-SSO, PCR-SSP, PCR–RFLP

Genotype frequency

86

30

64

DQB1*02, *03:02, *05:03

Párnická

2013

Slovakia

PV

43 (86)

113 (226)

DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16

DQB1*02, *03, *04, *05, *06

DRB1*14-DQB1*05:03, DRB1*14:54-DQB1*05:03, DRB1*14:04-DQB1*05:03, DRB1*14:05-DQB1*05:03

PCR-SSP

Allele frequency, haplotype frequency

87

Nikolic

2014

Serbia

MuSK MG

31 (62)

1992 (3984)

DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16

PCR with sequence-specific oligonucleotides

Genotype frequency, allele frequency, haplotype frequency

78

31 (62)

159 (318)

DQB1*02, *03, *04, *05, *06

DRB1*14-DQB1*05, DRB1*16-DQB1*05, DRB1*15-DQB1*06

De Sena Nogueira Maehara

2017

Brazil

Fogo selvagem

42 (84)

478 (956)

DRB1*02, *04, *05, *07, *16

PCR-SSO

Allele frequency

88

Netherlands

PF

17 (34)

447 (894)

DRB1*04

Coppo

2010

France

TTP

61

172

DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16

PCR-SSO

Genotype frequency

89

60

172

DQB1*02, *03, *04, *05, *06

Kanai

2016

Japan

MuSK MG

14

100

DRB1*01, *04, *08, *09, *11, *12, *13, *14, *15, 16

DQB1*03, *04, *05, *06

PCR-SSP

Genotype frequency, haplotype frequency

90

Piccinelli

2019

Italy

CIDP

24 (48)

216 (432)

DRB1*01, *03, *04, *07, *08, *10, *11, *13, *14, *15, *16

DQB1*02, *03, *04, *05, *06

DRB1*15-DQB1*06

PCR-SSP

Allele frequency, haplotype frequency

91

Zivanovic

2016

Serbia

PV

72 (144)

1992 (3984)

DRB1*01, *03, *04, *07, *11, *12, *13, *14, *15, *16

PCR-SSP

Allele frequency, haplotype frequency

79

72 (144)

159 (318)

DQB1*02, *03, *04, *05, *06

DRB1*14-DQB1*05, DRB1*16-DQB1*05, DRB1*15-DQB1*06

Saha

2019

UK

PF (Caucasian white British)

25 (50)

100 (200)

DRB1*01, *04, *14

DQB1*0302, *0501, *0502, *0503

PCR-SSP

Allele frequency

92

PF (Indo-Asians)

10 (20)

59 (118)

DRB1*01, *04, *14

DQB1*0302, *0501, *0503

Gil

2017

Brazil

PV

102

594

DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16

DQB1*02, *03, *04, *05, *06

PCR-SSP

Genotype frequency

93

Torzecka

2003

Poland

PF

15 (30)

152 (304)

DRB1*01, *03, *04, *07, *08, *09, *10 *11, *12, *13, *14, *15

Dynal RELI SSO HLA-DRB Test

Allele frequency

74

PV

38 (76)

152 (304)

DRB1*01, *03, *04, *07, *08, *09, *10 *11, *12, *13, *14, *15

Abida

2009

Tunisia

PF

90 (180)

270 (540)

DRB1*03, *04, *11, *13, *15

DQB1*0301, *0302, *06

PCR-SSP

Allele frequency

94

Ogata

2020

Japan

CIDP

22 (44)

418 (836)

DRB1*01, *03, *04, *08, *09, *10, *11, *12, *13, *14, *15, *16

DQB1*02, *03, *04, *05, *06

DRB1*14:05-DQB1*05:03, DRB1*15:01-DQB1*06:02, DRB1*15:02-DQB1*06:01

Next-generation sequencing

Allele frequency, haplotype frequency

95

Priyadarshini

2018

India

PV

50

50

DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16

DQB1*02, *03, *04, *05, *06

DRB1*14-DQB1*05, DRB1*15-DQB1*06

PCR-SSOP

Genotype frequency, haplotype frequency

96

Tunca

2010

Turkey

PV

25

113

DRB1*01, *03, *04, *05, *06, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16

DQB1*02, *03, *04, *05, *06

PCR-SSP

Genotype frequency

97

Haase

2015

Germany

PV (German)

46 (92)

74 (148)

DRB1*01, *02, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16

PCR-SSP

Allele frequency

98

PV (Egypt)

47 (94)

73 (146)

Martinez-Martinez

2017

Spain

CIDP

13

941

DRB1*15

DNA sequence analysis and SSP methodology

Genotype frequency, Haplotype frequency

99

13

35

DRB1*15-DQB1*06

Glorio

1999

Argentina

PV

30

199

DR3, DR4, DR8, DR14, DR15

DQB1*03, *05

PCR-SSO

Genotype frequency

100

Pavoni

2003

Brazil

Fogo selvagem

128

402

DRB1*01, *03, *04, 07, *08, *09, *10, *11, *12, *13, *14, *15, *16

PCR-SSOP

Genotype frequency

101

Thomas

1998

Spain

PV

26

200

DR1, DR2, DR3, DR4, DR7, DR8, DR9, DR10, DR11, DR12, DR13, DR14

PCR-SSOP, PCR-SSP

Genotype frequency

102

Zhang

2019

China

PF

72

501

DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16

DQB1*02, *03, *04, *05, *06

Affymetrix axiom precision medicine research array based GWAS

Genotype frequency, allele frequency

75

PV

255

501

Moraes

1991

Brazil

Fogo selvagem

37

49

DR1, DR16, DQ2

PCR-SSP

Genotype frequency

103

38

46

DRB1*15

38

41

DQB1*06

Lee

1998

South Korea

PF

15

100

DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16

DQB1*02, *03, *04, *05, *06

PCR-SSP

Genotype frequency

76

PV

15

100

Shams

2008

Iran

PV

52 (104)

180 (360)

DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16

DQB1*02, *03, *04, *05, *06

DRB1*15-DQA1*01-DQB1*06

DRB1*16-DQA1*01, DQB1*05

PCR-SSP

Allele frequency, haplotype frequency

104

Orouji

2014

Mid-east origin

PV

54

85

DQB1*02, *03, *04, *05, *06

PCR-SSP

Genotype frequency, allele frequency

105

Miyagawa

1997

Japan

PF

9

525

DRB1*04, *14

DQB1*03, *05

DRB1*14-DQA1*01-DQB1*05

NA

Genotype frequency, haplotype frequency

77

PV

7

525

Joly †

2020

France

TTP

26

172

DRB1*04, *11

DQB1*03

PCR-SSP

Genotype frequency, allele frequency

106

Glorio

2002

Argentina

PV

47

199

DR3, DR4, DR8, DR14, DR15

DQB1*03, *05

PCR-SSO

Genotype frequency

107

Sakai

2020

Japan

TTP

52 (104)

523 (1046)

DRB1*01, *04, *08, *09, *11, *12, *13, *14, *15

DQB1*03, *04, *05, *06

Commercial kits with Illumina MiSeq technology

Allele frequency

108

Koc

2012

Turkey

Pemphigus

60

60

DRB1*04, *11, *14

DQB1*02, *05, *06

PCR-SSP

Genotype frequency

109

Scully

2010

UK

TTP

50

200

DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16

DQB1*02, *03, *04, *05, *06

PCR-SSP, PCR-SSOP

Genotype frequency

110

Mobini

1997

Iran

PV

38

57

DRB1*14-DRB3*02-DQB1*05-DQA1*01,

DRB1*15-DRB5*01-DQB1*06-DQA1*01,

DRB1*15-DRB5*01-DQB1*06-DQA1*05

PCR-SSOP

Haplotype frequency

111

Delgado

1997

Pakistan

PV (Pakistan)

19 (38)

13 (26)

DRB1*01, *02, *03, *04, *07, *10, *11, *13, *14

DQB1*02, *03, *04, *05, *06

PCR-SSOP

Allele frequency

112

Europe

PV (Europe)

19 (38)

248 (496)

DRB1*01, *02, *04, *07, *08, *11, *12, *13, *14

DQB1*02, *03, *05, *06

Yamashina

1998

Japan

PV

17

525

DRB1*04, *14

DQB1*03, *05

PCR–RFLP

Genotype frequency, haplotype frequency

113

Al Haddad

2019

Lebanon

TTP

30

30

DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16

DQB1*02, *03, *04, *05, *06

PCR-SSP

Genotype frequency

114

John

2011

Germany

TTP

54

11,407

DRB1*01, *03, *04, *07, *08 *09, *11, *12, *13, *14

PCR-SSP, PCR-SSO

Genotype frequency

115

50

174

DQB1*02

54

174

DQB1*04, *05

47

174

DQB1*03

52

174

DQB1*06

Martino

2016

France

TTP

26 (52)

663 (1326)

DRB1*04, DRB1*11

PCR-SSO

Allele frequency

116

26 (52)

437 (874)

DQB1*03

24 (48)

100 (200)

DRB1*04, DRB1*11

DQB1*03

Cerna

1993

Brazil

Fogo selvagem

10

74

DRB1*04, *08, *14, *16

DQB1*03, *04

PCR-SSOP

Genotype frequency

117

Birol

2002

Turkey

Pemphigus

33

100

DR4, DR11, DR14

DQ2, DQ4

Microdroplet lymphocyte test

Genotype frequency

118

Rangel-Gamboa

2015

Mexico

PV

43 (86)

99 (198)

DR1, DR4, DR7, DR8, DR11, DR13, DR14, DR16

PCR-SSO

Allele frequency

119

Khan

2015

Pakistan

PV

28

150

DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16

PCR-SSP

Genotype frequency

120

Carcassi

1996

Italy

PV (Sardinians)

16 (32)

91 (182)

DRB1*03, *04, *08, *14

DQB1*02, *03, *05

PCR-SSO

Allele frequency

121

PV (Italians)

16 (32)

284 (568)

DRB1*03, *04, *08, *14

16 (32)

406 (812)

DQB1*02, *03, *05

Lombardi

1996

Italy

PV

33

102

DRB1*01, *03, *04, *07, *08, *11, *13, *14, *15, *16

DQB1*02, *03, *04, *05, *06

PCR-SSO

Genotype frequency

122

Saha

2010

UK

PV (white Europeans)

96 (192)

100 (200)

DRB1*03, *04, *07, *14, *15

DQB1*02, *03, *05, *06

PCR-SSP

Allele frequency

123

PV (Indo-Asians)

57 (114)

59 (118)

Niks

2006

Netherlands

MuSK MG

23

2440

DR1, DR3, DR14, DR16, DQ5, DQ6

PCR-amplified fragments and biotin labelled oligonucleotides

Genotype frequency, Haplotype frequency

124

23 (46)

321 (642)

DRB1*14-DQB1*05, DRB1*15-DQB1*05

Sinkovits

2017

Hungary

TTP

75

204

DRB1*01, *03, *04, *07, *08, *09, *10, *11, *12, *13, *14, *15, *16

PCR-SSO

Genotype frequency, Haplotype frequency

125

75

162

DRB1*14-DQB1*05, DRB1*16-DQB1*05, DRB1*15-DQB1*06

  1. PV pemphigus vulgaris, PF pemphigus foliaceus, CIDP chronic inflammatory demyelinating polyneuropathy, TTP thrombotic thrombocytopenic purpura, MuSK MG muscle-specific kinase myasthenia gravis, PCR polymerase chain reaction, SSP sequence specific primer, SSO(P) sequence specific oligonucleotides (probes), RFLP, restriction fragment length polymorphism. † Study was included in the qualitative synthesis, but excluded from the meta-analysis as it did not fit all selection criteria.