Table 2 Genes encoded by two Launaea and eight Reichardia chloroplast genomes.
Category | Group | Genes |
|---|---|---|
Photosynthesis | Subunits_of_photosystem_I | psaA, psaB, psaC, psaI, and psaJ |
Subunits_of_photosystem_II | psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, and psbZ | |
Subunits_of_NADH_dehydrogenase | ndhA*, ndhB(\(\times\)2)*, ndhC, ndhD, ndhE, ndhF, ndhG, ndhH, ndhI, ndhJ, and ndhK | |
Subunits_of_cytochrome_b/f_complex | petA, petB*, petD*, petG, petL, and petN | |
Subunits_of_ATP_synthase | atpA, atpB, atpE, atpF*, atpH, and atpI | |
Large_subunit_of_Rubisco | rbcL | |
Self-replication | Large_subunits_of_ribosome | rpl2(\(\times\)2)*, rpl14, rpl16*, rpl20, rpl22, rpl23(\(\times\)2), rpl32, rpl33, and rpl36 |
Small_subunits_of_ribosome | rps2, rps3, rps4, rps7(\(\times\)2), rps8, rps11, rps12 (\(\times\)2)**, rps14, rps15, rps16*, rps18, and rps19 | |
DNA-dependent_RNA_polymerase | rpoA, rpoB, rpoC1*, and rpoC2 | |
translation initiation factor | infA | |
Ribosomal_RNAs | rrn5(\(\times\)2), rrn16(\(\times\)2), and rrn23(\(\times\)2) | |
Transfer_RNAs | trnA-UGC(\(\times\)2)*, trnC-GCA, trnD-GUC, trnE-UUC(\(\times\)3)*, trnF-GAA, trnG-GCC, trnH-GUG, trnK-UUU*, trnL-CAA(\(\times\)2)*, trnL-UAA, trnL-UAG, trnM-CAU(\(\times\)4), trnN-GUU(\(\times\)2), trnP-UGG, trnQ-UUG, trnR-ACG(\(\times\)2), trnR-UCU, trnS-CGA, trnS-GCU*, trnS-GGA, trnS-UGA, trnS-GGU, trnT-UGU, trnV-GAC(\(\times\)2), trnV-GCA, trnW-CCA, and trnY-GUA | |
Other genes | Maturase | matK |
Protease | clpP** | |
Envelope_membrane_protein | cemA | |
Acetyl-CoA_carboxylase | accD | |
C-type_cytochrome_synthesis_gene | ccsA | |
Genes of unknown function | Proteins_of_unknown_function | ycf1, ycf2(\(\times\)2), ycf3**, ycf4, ycf15(\(\times\)2) |