Table 3 Characteristics of fourteen nucleotide sequence and amino acid sequence matrices used in the current phylogenetic analyses, consisting of mtgenomes only or mtgenomes plus eight nDNAs.

Matrices	No. of ingroup taxa	Genes	Original lengths	Gblocks		Final lengths
Matrices	No. of ingroup taxa	Genes	Original lengths	Discarded nucleotides or amino acids	Fully excluded genes	Final lengths
Mnt	56 symphytans	13 mtPCGs	7964	1414	–	6550
Maa	56 symphytans	13 mtPCGs	3969	998	–	2971
MNnt	25 symphytans	13 mtPCGs + 8 nDNA^d	11,095	1301	GS	9794
MNaa	25 symphytans	13 mtPCGs + 8 nDNA^d	4993	1014	GS	3979
Mnt + O^a	57 symphytans	13 mtPCGs	7952	1437	–	6515
Maa + O	57 symphytans	13 mtPCGs	3963	1017	–	2946
MNnt + O	26 symphytans	13 mtPCGs + 8 nDNA	11,113	1393	GS	9720
MNaa + O	26 symphytans	13 mtPCGs + 8 nDNA	5002	1106	GS	3896
Mnt + OS^b	59 symphytans	13 mtPCGs	7974	1795	–	6179
Maa + OS	59 symphytans	13 mtPCGs	3974	1116	–	2858
MNnt + OS	28 symphytans	13 mtPCGs + 8 nDNA	11,141	1423	–	9718
MNaa + OS	28 symphytans	13 mtPCGs + 8 nDNA	5016	1148	–	3868
Mnt + A^c	56 symphytans + 54 apocritans	13 mtPCGs	8502	3333	–	5169
Maa + A	56 symphytans + 54 apocritans	13 mtPCGs	4238	2045	atp8	2193

^aInclusion of Orussoidea.
^bInclusion of Siricoidea.
^cInclusion of Apocrita.
^dCAD, GLN, GS, IDH, NAK, PGD, POL, and TPI (see Malm and Nyman¹⁶ for the detailed information).

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