Table 3 Sequencing results for 11 Plasmodium genus positive samples based on the closest reference of Plasmodium species according to the BLAST search analysis of the SSU rRNA gene sequences. Samples from four cases (numbers 6, 12, 13 and 14 in Table 2) were not sequenced because the sequence length was < 100 bp. Samples from cases 7, 10 and 11 were sequenced using different primers or different Nest-1 products, or both.
From: A survey of simian Plasmodium infections in humans in West Kalimantan, Indonesia
No. | Primers | DNA sequence length (bp) | Closest Plasmodium species reference | Similarity |
|---|---|---|---|---|
7 | rPLU3 + rPLU4 | 183 | P. inui clone B0362A91 | 100% |
7 | PlasmoM_N2F + PlasmoM_N2R | 248 | P. inui clone B0362A91 | 100% |
8 | rPLU3 + rPLU4 | 183 | P. knowlesi isolate KM12k | 100% |
9 | rPLU3 + rPLU4 | 183 | P. knowlesi isolate KH96A-type | 100% |
10A | rPLU3 + rPLU4 | 174 | P. knowlesi clone B0362B12 | 100% |
10B | rPLU3 + rPLU4 | 174 | P. fieldi clone LT3-B11 | 100% |
11A | rPLU3 + rPLU4 | 183 | P. inui clone B0362A91 | 100% |
11B | rPLU3 + rPLU4 | 183 | P. inui clone B0362A91 | 100% |
11 | PlasmoM_N2F + PlasmoM_N2R | 226 | P. knowlesi strain H | 97.74% |
15 | rPLU3 + rPLU4 | 174 | P. knowlesi clone B21-87 | 100% |
16 | rPLU3 + rPLU4 | 183 | P. coatneyi isolate B136co | 100% |
