Figure 4

Alpha-diversity comparisons between datasets. (A) Species richness plot between healthy and diseased datasets, (B) species richness plot comparison between all phenotypes, (C) Shannon-diversity plot between healthy and diseased datasets, and (D) Shannon-diversity plot between all phenotypes. Two-sided Mann–Whitney U test was used to compare respective disease datasets against the healthy dataset. The p-value significance are shown above violin plots: ns (non-significant; p-value \(> 0.05\)), *(p-value \(< 0.05\)), **(p-value \(< 0.01\)), ***(p-value \(< 1e{-}3\)), ****(p-value \(< 1e{-}4\)).