Table 2 Comparing Performance of DeepLPI, DeepCDA and DeepDTA on the internal independent testing set from the BindingDB data.
AUROC | Sensitivity | Specificity | PPV | NPV | |
|---|---|---|---|---|---|
DeepLPI | 0.925 | 0.855 | 0.862 | 0.306 | 0.988 |
DeepCDA | 0.912 | 0.766 | 0.896 | 0.342 | 0.982 |
DeepDTA | 0.909 | 0.865 | 0.795 | 0.221 | 0.989 |
Unseen testsets combined | |||||
This work | 0.791 | 0.661 | 0.789 | 0.132 | 0.980 |
DeepCDA | 0.741 | 0.511 | 0.813 | 0.495 | 0.823 |