Table 3 RMSD between native solute carrier transporters, their water-soluble QTY variants, and crystal structures.

From: Structural informatic study of determined and AlphaFold2 predicted molecular structures of 13 human solute carrier transporters and their water-soluble QTY variants

Name

PDB

RMSDNative/PDB

RMSDQTY/PDB

SLC2A1

6THA

2.969

1.053

SLC7A11

7P9V

2.682

1.548

SLC4A4

6CAA

1.588

1.497

SLC1A5

5LM4

0.607

1.272

SLC7A5

7DSK

2.523

1.008

SLC29A1

6OB7

0.619

1.198

  1. Residue mean-square distance (RMSD) in Å, – = not applicable. All RMSD values are below 3 Å and show good superposition between structures. All models and scripts for structure preparation and superposition in PyMOL are presented in the GitHub repository: https://github.com/eva-smorodina/slc.
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