Table 6 Log2 median ratio counts of taxa associated with COVID-19 mortality when comparing deceased (n = 10) versus survived (n = 15).

log₂ median ratio	Median diff	Mean diff	p value	q value	Taxonomy
2.25	0.361	0.371	0.00017	0.00691	Comamonadaceae
5.21	0.405	0.377	0.00017	0.00691	Variovorax
2.97	0.002	0.002	0.00353	0.074	Vibrionales
2.97	0.002	0.002	0.00353	0.074	Vibrionaceae
3.8	0.002	0.00181	0.00492	0.0827	Vibrio
1.84	0.0549	0.13	0.0137	0.124	Bacilli
2.24	0.403	0.297	0.0163	0.124	Burkholderiales
3.16	0.002	0.002	0.0157	0.124	Alteromonadales
3.61	0.004	0.004	0.0156	0.124	Yersiniaceae
2.1	0.005	0.00435	0.0156	0.124	Salmonella
1.77	0.011	0.064	0.0475	0.274	Streptococcaceae
2.29	0.425	0.296	0.0264	0.185	Betaproteobacteria
−5.13	−0.103	−0.104	0.0308	0.199	Bacteroidia
−5.18	−0.099	−0.102	0.00962	0.124	Bacteroidales

Comparisons were conducted using Wilcoxon rank sum test and adjusted for multiple test comparisons using the Benjamini Hochberg correction method. A full list of significant taxonomic comparison values at the species level can be found in Supplementary Table 8.

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