Table 1 OOB error rate (%) and the CPP of the different gene sets: all differentially expressed, and top 150, 100, 50 and 30 bases on Mean Decrease in the Gini and Mean Accuracy Decrease. CCP = (1-classification error).
All DE | Mean decrease in the gini | Mean accuracy decrease | |||||||
|---|---|---|---|---|---|---|---|---|---|
150 | 100 | 50 | 30 | 150 | 100 | 50 | 30 | ||
OOB error rate (%) | 18.97 | 8.62 | 8.62 | 6.9 | 6.9 | 8.62 | 8.62 | 6.9 | 6.9 |
CCP FWR | 0.80 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 |
CCP SWR | 0.96 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 |
CCP IHS | 0.67 | 0.80 | 0.80 | 0.84 | 0.84 | 0.80 | 0.80 | 0.84 | 0.84 |
