Table 1 The conserved motifs found in promoter regions of differentially expressed genes (DEGs) using the MEME analysis tool.
Motif logo | E-value | Width | Best match in CIS-BP | Top significant BP terms identified by GOMO | |
|---|---|---|---|---|---|
Motif 1 |
| 7.10E−165 | 50 | M06695 | BP regulation of transcription |
Motif 2 |
| 8.20E−143 | 29 | M06719 | BP regulation of transcription, DNA-dependent |
Motif 3 |
| 1.20E−93 | 21 | M06704, M06818, M06805, M06796 | BP cytoskeleton organization BP regulation of transcription, DNA-dependent |
Motif 4 |
| 1.00E−54 | 29 | M01106, M06704, M01108, M06695 | BP regulation of transcription |
Motif 5 |
| 1.00E−38 | 37 | ||
Motif 6 |
| 4.30E−31 | 29 | ||
Motif 7 |
| 9.30E−36 | 29 | M06704, M06805, M06695 | BP regulation of transcription |
Motif 8 |
| 2.90E−16 | 21 | M06704, M06805, M06818 | BP transmembrane receptor protein tyrosine kinase signaling pathway |
Motif 9 |
| 1.30E−12 | 41 | ||
Motif 10 |
| 1.60E−07 | 50 | BP regulation of transcription | |
Motif 11 |
| 1.70E−06 | 15 | M06719 | BP leaf development BP regulation of transcription, DNA-dependent |
Motif 12 |
| 5.00E−05 | 15 | M06704 | BP regulation of transcription |
Motif 13 |
| 1.80E−04 | 20 | BP regulation of transcription, DNA-dependent | |
Motif 14 |
| 2.10E−02 | 41 | BP translation |
