Table 5 Sequences alignment for CDS and amino acid of the part genes related to qSD.A9-1 (qSL.A9) between 4263 and 3001.

From: QTL mapping for seed density per silique in Brassica napus

GeneID

The base for CDS

Amino acid change

Mutation position

4263

3001

Mutation position

4263

3001

chrA09g005039

346

G

A

116

V

M

523

A

G

175

T

A

1003

C

G

335

P

A

1087

C

T

363

H

Y

chrA09g005048

73

C

T

25

L

F

chrA09g005049

122

A

C

41

K

T

370

A

T

124

T

S

763

G

A

255

G

R

1014

G

C

338

K

N

chrA09g005056

25

T

C

9

F

L

chrA09g005059

315

C

A

105

D

E

527

T

C

176

M

T

961–963

CCA

–

321

P

–

chrA09g005072

551

G

C

184

G

A

chrA09g005075

47

C

G

16

S

C

829

A

G

277

S

G

893

G

A

298

R

K

1132

A

G

378

I

V

1188–1189

–

CCTCCT

396–397

–

PP

chrA09g005077

603

C

G

201

D

E

1253

C

A

418

T

N

chrA09g005091

166

C

T

56

L

F

chrA09g005092

602

G

C

201

G

A

Back to article page