Table 4 Differential abundance analysis investigating the effect of breed on the abundance bacterial and archaeal taxa in solid, liquid and epithelial ruminal fractions.
From: Breed and ruminal fraction effects on bacterial and archaeal community composition in sheep
Rank | Classification | Cheviot Mean ± Sd | Connemara Mean ± Sd | Lanark Mean ± Sd | Perth Mean ± Sd | P.adj | |
|---|---|---|---|---|---|---|---|
Solid fraction | |||||||
ASV55 | Genus | Sharpea | 1.37 ± 0.35b | 1.90 ± 0.71ab | 1.55 ± 0.84ab | 2.28 ± 0.51a | 0.009 |
ASV55 | ASV | Sharpea azabuensis | 1.34 ± 0.34b | 1.93 ± 0.73ab | 1.58 ± 0.87ab | 2.24 ± 0.51a | 0.023 |
ASV37 | ASV | F_Lachnospiraceae | 2.22 ± 0.46a | 2.40 ± 0.49ab | 1.92 ± 0.50b | 2.60 ± 0.53a | 0.024 |
Epithelial fraction | |||||||
ASV247 | Family | Family XIII | 2.84 ± 0.22b | 3.03 ± 0.17ab | 3.33 ± 0.28a | 2.95 ± 0.18b | < 0.001 |
ASV379 | ASV | F_Family XIII | 1.15 ± 0.39ab | 1.44 ± 0.19ab | 2.02 ± 0.47a | 1.05 ± 0.43b | 0.005 |