Table 2 The EC change (logratio) with respect to the original strain for each mutated amino acid residue is reported.

From: Computational analysis of the sequence-structure relation in SARS-CoV-2 spike protein using protein contact networks

Strain

Mutated residue

modEC

effect

Alpha

501

− 1.89267

Null

Alpha

570

− 0.16767  

Null

Alpha

614

− 0.375

Null

Alpha

716

0.060667

Null

Alpha

1118

0.095333

Null

Delta

142

− 0.352

Null

Delta

452

0.321667

Null

Delta

614

0.321667

Null

Delta

950

0.028

Null

Omicron

67

− 0.786

Null

Omicron

142

− 1.08433

Null

Omicron

339

2.449667

Positive

Omicron

371

3.125667

Positive

Omicron

373

2.703333

Positive

Omicron

375

2.721333

Positive

Omicron

417

3.207

Positive

Omicron

440

2.709667

Positive

Omicron

493

2.906333

Positive

Omicron

496

2.876

Positive

Omicron

498

2.930667

Positive

Omicron

501

2.826

Positive

Omicron

547

1.134667

Null

Omicron

614

− 2.14667

Negative

Omicron

655

− 2.32667

Negative

Omicron

764

− 0.82067

Null

Micron

796

− 3.03567

Negative

Omicron

856

1.23533

Null

Omicron

954

0.017667

Null

Omicron

969

3.31266

Null

  1. The absence of any relevant change in EC of the Alpha and Delta strain is worth than nothing, while 14/21 (67%) Omicron mutations imply a significant change with respect to the original strain. Moreover the distribution of positive and negative changes is far from random, positive changes being concentrated in RBD domain, while negative changes are only found in the splicing domain.