Table 2 Performances of various methods on KIBA dataset.

From: Deep learning-based network pharmacology for exploring the mechanism of licorice for the treatment of COVID-19

Method

Proteins and compounds

MSE

CI

KronRLS37

S–W & Pubchem Sim

0.411

0.782

SimBoost38

S–W & Pubchem Sim

0.222

0.836

DeepDTA15

S–W & Pubchem Sim

0.502

0.710

DeepDTA15

CNN&Pubchem Sim

0.271

0.718

DeepDTA15

S–W &CNN

0.204

0.854

DeepDTA15

CNN & CNN

0.194

0.863

WideDTA39

PS + PDM & LS + LMCS

0.179

0.875

DeepPurpose19

GCN & CNN

0.177

0.879

DeepDGC

CNN & CNN + GCN

0.162

0.888

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