Table 4 Association between PRSs for ten significant gut microbiota genera and APOE rs429358.

From: Genetic correlations between Alzheimer’s disease and gut microbiome genera

Trait

Samples

Coeff

SE

z-value

P

OR (95%CI)

Adlercreutzia

ADc12

− 0.051

0.031

− 1.643

0.1006

0.95 (0.89–1.01)

GenADA

− 0.093

0.040

− 2.309

0.0211

0.91 (0.84–0.99)

Meta-analysis

− 0.067

0.025

− 2.712

0.0067

0.94 (0.89–0.98)

Bacteroides

ADc12

0.019

0.031

0.608

0.5434

1.02 (0.96–1.08)

GenADA

0.014

0.040

0.350

0.7263

1.01 (0.94–1.10)

Meta-analysis

0.017

0.025

0.695

0.4871

1.02 (0.97–1.07)

Collinsella

ADc12

0.137

0.031

4.413

1.06E-5

1.15 (1.08–1.22)

GenADA

0.118

0.040

2.930

0.0034

1.12 (1.04–1.22)

Meta-analysis

0.130

0.025

5.283

1.27E-7

1.14 (1.09–1.19)

Eisenbergiella

ADc12

− 0.105

0.031

− 3.382

0.0007

0.90 (0.85–0.96)

GenADA

0.007

0.040

0.180

0.8575

1.01 (0.93–1.09)

Meta-analysis

− 0.052

0.056

− 0.924

0.3553

0.95 (0.85–1.06)

Eubacterium Fissicatena

ADc12

− 0.111

0.031

− 3.557

0.0004

0.90 (0.84–0.95)

GenADA

− 0.010

0.040

− 0.252

0.8011

0.99 (0.91–1.07)

Meta-analysis

− 0.064

0.050

− 1.270

0.2042

0.94 (0.85–1.04)

Eubacterium Nodatum

ADc12

− 0.097

0.031

− 3.130

0.0018

0.91 (0.85–0.96)

GenADA

− 0.043

0.040

− 1.080

0.2804

0.96 (0.88–1.04)

Meta-analysis

− 0.077

0.026

− 2.912

0.0036

0.93 (0.88–0.98)

Gordonibacter

ADc12

− 0.108

0.031

− 3.460

0.0005

0.90 (0.84–0.95)

GenADA

− 0.014

0.040

− 0.352

0.7248

0.99 (0.91–1.07)

Meta-analysis

− 0.064

0.047

− 1.383

0.1668

0.94 (0.86–1.03)

Lachnospira

ADc12

0.047

0.031

1.524

0.1277

1.05 (0.99–1.11)

GenADA

0.047

0.040

1.169

0.2425

1.05 (0.97–1.13)

Meta-analysis

0.047

0.025

1.921

0.0548

1.05 (1.00–1.10)

Prevotella9

ADc12

− 0.046

0.031

− 1.486

0.1373

0.95 (0.90–1.01)

GenADA

− 0.074

0.040

− 1.836

0.0666

0.93 (0.86–1.01)

Meta-analysis

− 0.057

0.025

− 2.299

0.0215

0.94 (0.90–0.99)

Veillonella

ADc12

0.092

0.031

2.946

0.0032

1.10 (1.03–1.17)

GenADA

− 0.027

0.040

− 0.664

0.5071

0.97 (0.90–1.05)

Meta-analysis

0.035

0.059

0.596

0.5513

1.04 (0.92–1.16)

  1. Genera in bold are four genera identified to have genetically significant correlation with APOE rs429358 minor allele C in the meta-analysis (p < 0.05). Collinsella was the only genus that showed significant correlation in both discovery and replication samples.