Table 1 Taxa used in the phylogenetic analyses and their corresponding GenBank numbers.
From: Identification and pathogenicity analysis of leaf brown spot of Juglans regia in China
Species | Strain numbers | Hosts | Countries | ITS | TUB | LSU | RPB2 |
|---|---|---|---|---|---|---|---|
Allophoma labilis | CBS 124.93 | Lycopersicon esculentum | Netherlands | GU237765 | GU237619 | GU238091 | KT389552 |
Allophoma minor | CBS 325.82 | Syzygium aromaticum | Indonesia | GU237831 | GU237632 | GU238107 | KT389553 |
Allophoma nicaraguensis | CBS 506.91 | Coffea arabica | Nicaragua | GU237876 | GU237596 | GU238058 | KT389551 |
Allophoma tropica | CBS 436.75 | Saintpaulia ionantha | Germany | GU237864 | GU237663 | GU238149 | KT389556 |
Ascochyta boeremae | CBS 372.84 | Pisum sativum | Australia | KT389480 | KT389774 | KT389697 | NA |
Ascochyta phacae | CBS 184.55 | Phaca alpina | Switzerland | KT389475 | KT389769 | KT389692 | NA |
Ascochyta rabiel | CBS 534.65 | Cicer arietinum | India | GU237886 | GU237533 | GU237970 | KP330405 |
Boeremia diversispora | CBS 102.80 | Phaseolus vulgaris | Kenya | GU237725 | GU237492 | GU237930 | KT389565 |
Boeremia foveata | CBS 109176 | Solanum tuberosum | Bulgaria | GU237742 | GU237508 | GU237946 | KT389578 |
Boeremia noackiana | CBS 100353 | Phaseolus vulgaris | Guatemala | GU237710 | GU237514 | GU237952 | NA |
Briansuttonomyces eucalypti | CBS 114879 | Eucalyptus sp. | South Africa | KU728479 | KU728595 | KU728519 | NA |
Calophoma clematidina | CBS 108.79 | Clematis sp. | Netherlands | MH861182 | FJ427100 | FJ515632 | KT389588 |
Calophoma complanata | CBS 100311 | Heracleum sphondylium | Netherlands | GU237709 | GU237594 | EU754181 | KT389590 |
Calophoma vodaki | CBS 173.53 | Hepatica triloba | Switzerland | KT389497 | KT389791 | KT389714 | NA |
Didymella americana | CBS 185.85 | Zea mays | USA | FJ426972 | FJ427088 | GU237990 | KT389594 |
Didymella anserina | CBS 285.29 | Calluna sp. | UK | KT389499 | KT389796 | KT389716 | NA |
Didymella mascrostoma | CBS 223.69 | Acer pseudoplatanus | Switzerland | GU237801 | GU237623 | GU238096 | KT389608 |
Didymella sancta | CBS 281.83 | Ailanthus altissima | South Africa | FJ427063 | FJ427170 | GU238030 | KT389623 |
Epicoccum brasiliense | CBS 120105 | Amaranthus sp. | Brazil | GU237760 | GU237588 | GU238049 | KT389627 |
Epicoccum draconis | CBS 186.83 | Dracaena sp. | Rwanda | GU237795 | GU237607 | GU238070 | KT389628 |
Epicoccum nigrum | CBS 125.82 | Human toenail | Netherlands | FJ426995 | FJ427106 | GU237974 | KT389631 |
Epicoccum sorghinum | CBS 179.80 | Sorghum vulgare | Puerto Rico | FJ427067 | FJ427173 | GU237978 | KT389635 |
Heterophoma adonidis | CBS 114309 | Adonis vernalis | Sweden | KT389506 | KT389803 | KT389724 | KT389637 |
Heterophoma poolensis | CBS 116.93 | Antirrhinum majus | Netherlands | GU237755 | GU237649 | GU238134 | NA |
Heterophoma sylvatica | CBS 874.97 | Melampyrum pratense | Netherlands | GU237907 | GU237662 | GU238148 | NA |
Leptosphaerulina arachidicola | CBS 275.59 | Arachis hypogaea | Taiwan China | GU237820 | GU237543 | GU237983 | NA |
Leptosphaerulina australis | CBS 317.83 | Eugenia aromatica | Indonesia | GU237829 | GU237540 | EU754166 | GU371790 |
Leptosphaerulina trifolii | CBS 235.58 | Trifolium sp. | Netherlands | GU237806 | GU237542 | GU237982 | NA |
Macroventuria anomochaeta | CBS 502.72 | Medicago sativa | South Africa | GU237873 | GU237545 | GU237985 | NA |
Neoascochyta argentina | CBS 112524 | Triticum aestivum | Argentina | KT389524 | KT389822 | KT389742 | NA |
Neoascochyta graminicola | CBS 301.69 | Lolium multiflorum | Germany | KT389519 | KT389817 | KT389737 | KT389650 |
Neoascochyta triticicola | CBS 544.74 | Triticum aestivum | South Africa | GU237887 | GU237488 | EU754134 | KT389652 |
Neodidymelliopsis cannabis | CBS 121.75 | Urtica dioica | Netherlands | GU237761 | GU237535 | GU237972 | NA |
Neodidymelliopsis Polemonii | CBS 375.67 | Polemonium caeruleum | Netherlands | KT389530 | KT389828 | KT389748 | NA |
Neodidymelliopsis xanthina | CBS 168.70 | Delphinium sp. | Netherlands | KT389533 | KT389831 | KT389751 | NA |
Nothophoma acaciae | CBS 143404 | Acacia melanoxylon | Australia | MG386056 | MG386167 | MG386109 | MG386144 |
Nothophoma anigozanthi | CBS 381.91 | Anigozanthus maugleisii | Netherlands | GU237852 | GU237580 | GU238039 | KT389655 |
Nothophoma arachidis-hypogaeae | CBS 125.93 | Arachis hypogaea | India | GU237771 | GU237583 | GU238043 | KT389656 |
Nothophoma brennandiae | CBS 140541 | House dust | Canada | MN973558 | MT005661 | MN943765 | MT018202 |
Nothophoma chromolaenae | MFLUCC 17-1443 | Chromolaena odorata | Thailand | MT214364 | NA | MT214458 | NA |
Nothophoma eucalyptigena | CBS 142535 | Eucalyptus | Australia | KY979771 | KY979935 | KY979826 | KY979852 |
Nothophoma garlbiwalawarda | BRIP 69595 | Senna artemisioides | Australia | MN567686 | NA | NA | MN604937 |
Nothophoma infuscata | CBS 121931 | Acacia longifolia | New Zealand | MN973559 | MT005662 | MN943766 | MT018203 |
Nothophoma quercina | CBS 633.92 | Quercus sp. | Ukraine | GU237900 | GU237609 | EU754127 | KT389657 |
Nothophoma quercina | SICAUCC 22-0080 | Juglans regia | China | ON707468 | ON645232 | ON707463 | ON645227 |
Nothophoma quercina | SICAUCC 22-0081 | Juglans regia | China | ON707469 | ON645233 | ON707464 | ON645228 |
Nothophoma quercina | SICAUCC 22-0082 | Juglans regia | China | ON707470 | ON645234 | ON707465 | ON645229 |
Nothophoma quercina | SICAUCC 22-0083 | Juglans regia | China | ON707471 | ON645235 | ON707466 | ON645230 |
Nothophoma gossypiicola | CBS 377.6 | Gossypium sp. | USA | GU237845 | GU237611 | GU238079 | KT389658 |
Nothophoma gossypiicola | CBS 377.6 | Gossypium sp. | USA | GU237845 | GU237611 | GU238079 | KT389658 |
Nothophoma infossa | CBS 123395 | Fraxinus pennsylvanica | Argentina | FJ427025 | FJ427135 | GU238089 | KT389659 |
Nothophoma macrospora | CBS 140674 | Human | USA | LN880536 | LN880539 | LN880537 | LT593073 |
Nothophoma naiawu | BRIP 69583 | Senna artemisioides | Australia | MN5676787 | NA | NA | MN5676787 |
Nothophoma ngayawang | BRIP 69582 | Senna artemisioides | Australia | MN567688 | NA | NA | MN604939 |
Nothophoma nullicana | CPC 32330 | Acacia falciformis | Australia | NR 156,665 | NA | NA | MH853662 |
Nothophoma prosopidis | CPC 21699 | Prosopis sp. | South Africa | KF777149 | NA | KF777204 | NA |
Nothophoma pruni | MFLUCC 18-1601 | Malus micromalus | China | MH827005 | MH853669 | MH827026 | MH853662 |
Nothophoma pruni | JZB 380015 | Prunus avium | China | MH827004 | MH853668 | MH827025 | MH853661 |
Nothophoma raii | A 189 | Soil | India | MF664467 | MF664468 | NA | NA |
Nothophoma spiraeae | CFCC 53928 | Spiraea salicifolia | China | MN737833 | MN879295 | MN737828 | MN879292 |
Nothophoma spiraeae | CFCC 53929 | Spiraea salicifolia | China | MN737834 | MN879296 | MN737829 | MN879293 |
Nothophoma spiraeae | CFCC 53930 | Spiraea salicifolia | China | MN737832 | MN879297 | MN737830 | MN879294 |
Nothophoma variabilis | DI16-285 | Human | USA | LT592939 | LT593008 | LN907428 | LT593078 |
Paraboeremia adianticola | CBS 187.83 | Polystichum adiantiforme | USA | GU237796 | GU237576 | GU238035 | KP330401 |
Paraboeremia putaminum | CBS 372.91 | Ulmus sp. | Netherlands | GU237843 | GU237651 | GU238137 | NA |
Paraboeremia selaginellae | CBS 122.93 | Selaginella sp. | Netherlands | GU237762 | GU237656 | GU238142 | NA |
Phoma herbarum | CBS 304.51 | Achillea millefolium | Switzerland | KT389538 | KT389836 | KT389755 | NA |
Phomatodes aubrietiae | CBS 383.67 | Aubrietia hybrida | Netherlands | GU237854 | GU237584 | GU238044 | NA |
Phomatodes nebulosa | CBS 117.93 | Mercurialis perennis | Netherlands | GU237757 | GU237633 | GU238114 | KP330425 |
Stagonosporopsis actaeae | CBS 114303 | Actaea spicata | Sweden | KT389544 | KT389847 | KT389760 | NA |
Stagonosporopsis helianthi | CBS 200.87 | Helianthus annuus | Italy | KT389545 | KT389848 | KT389761 | KT389683 |
Xenodidymella applanata | CBS 195.36 | Rubus idaeus | Netherlands | KT389548 | KT389852 | KT389764 | NA |
Xenodidymella catariae | CBS 102635 | Nepeta catenaria | Netherlands | GU237727 | GU237524 | GU237962 | KP330404 |
Xenodidymella humicola | CBS 220.85 | Franseria sp. | USA | GU237800 | GU237617 | GU238086 | KP330422 |
