Table 2 General information and comparison of chloroplast genomes of the 57 cp genomes of Polygonatum and 4 cp genomes of Heteropolygonatum.
Species | Genome length (bp) | GC content (%) | Gene number | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Total | LSC | SSC | IR | Total | LSC | SSC | IR | Total | PCG | tRNA | rRNA | |
H. alternicirrhosum | 155,944 | 84,968 | 18,520 | 52,456 | 131 (113) | 85 (79) | 38 (30) | 8 (4) | 37.6 | 35.6 | 31.5 | 43.0 |
H. ginfushanicum | 155,508 | 84,552 | 18,528 | 52,428 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.6 | 35.6 | 31.4 | 43.0 |
H. ogisui | 155,665 | 84,784 | 18,533 | 52,348 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.6 | 35.6 | 31.4 | 43.0 |
H. pendulum | 155,436 | 84,609 | 18,365 | 52,462* | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.7 | 43.0 |
P. acuminatifolium | 155,354 | 84,271 | 18,455 | 52,628 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.8 | 31.6 | 43.0 |
P. annamense | 155,277 | 84,340 | 18,422 | 52,515* | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.6 | 43.0 |
P. biflorum | 155,470 | 84,291 | 18,469 | 52,710* | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.6 | 43.0 |
P. campanulatum | 155,487 | 84,458 | 18,373 | 52,656 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.6 | 35.7 | 31.7 | 42.9 |
P. cirrhifolium | 155,944 | 84,568 | 18,546 | 52,830 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.6 | 35.7 | 31.5 | 42.9 |
P. curvistylum | 155,939 | 84,563 | 18,546 | 52,830 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.6 | 35.7 | 31.5 | 42.9 |
P. cyrtonema1 | 155,509 | 84,448 | 18,303 | 52,758 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.7 | 43.0 |
P. cyrtonema2 | 155,512 | 84,462 | 18,292 | 52,758 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.7 | 42.9 |
P. cyrtonema3 | 155,164 | 84,023 | 18,495 | 52,646 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.6 | 43.0 |
P. cyrtonema4 | 155,614 | 84,452 | 18,420 | 52,742 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.7 | 43.0 |
P. cyrtonema5 | 155,044 | 83,896 | 18,498 | 52,650 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.6 | 43.0 |
P. cyrtonema6 | 155,205 | 84,457 | 18,210 | 52,538 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.7 | 43.0 |
P. filipes1 | 155,361 | 84,307 | 18,454 | 52,600 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.6 | 43.0 |
P. filipes2 | 155,334 | 84,280 | 18,454 | 52,600 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.6 | 43.0 |
P. filipes3 | 155,317 | 84,262 | 18,455 | 52,600 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.6 | 43.0 |
P. filipes4 | 155,337 | 84,262 | 18,455 | 52,620 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.6 | 43.0 |
P. franchetii | 155,962 | 84,722 | 18,566 | 52,674 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.5 | 43.0 |
P. govanianum | 155,089 | 84,212 | 18,228 | 52,649* | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.6 | 43.0 |
P. hirtum | 155,490 | 84,385 | 18,419 | 52,686 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.6 | 42.9 |
P. hookeri | 155,976 | 84,600 | 18,546 | 52,830 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.5 | 42.9 |
P. hunanense1 | 155,618 | 84,448 | 18,426 | 52,744 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.5 | 42.9 |
P. hunanense2 | 155,609 | 84,438 | 18,427 | 52,744 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.6 | 42.9 |
P. hunanense3 | 155,608 | 84,437 | 18,427 | 52,744 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.5 | 42.9 |
P. hunanense4 | 155,618 | 84,448 | 18,426 | 52,744 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.5 | 42.9 |
P. inflatum | 154,898 | 84,270 | 18,454 | 52,174 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.6 | 43.0 |
P. involucratum1 | 155,370 | 84,280 | 18,450 | 52,640 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.6 | 43.0 |
P. involucratum2 | 155,372 | 84,282 | 18,450 | 52,640 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.6 | 43.0 |
P. kingianum1 | 155,826 | 84,627 | 18,547 | 52,652 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.6 | 43.0 |
P. kingianum2 | 155,824 | 84,632 | 18,570 | 52,622 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.5 | 43.0 |
P. kingianum3 | 155,824 | 84,626 | 18,546 | 52,652 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.6 | 43.0 |
P. macropodum | 154,610 | 83,554 | 18,464 | 52,592 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.8 | 31.6 | 43.0 |
P. mengtzense | 155,498 | 84,498 | 18,469 | 52,531* | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.5 | 43.0 |
P. multiflorum | 154,564 | 83,525 | 18,457 | 52,582 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.8 | 31.5 | 43.0 |
P. nodosum | 155,205 | 84,143 | 18,422 | 52,640 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.6 | 43.0 |
P. odoratum | 154,569 | 83,486 | 18,459 | 52,624 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.8 | 35.8 | 31.6 | 43.0 |
P. oppositifolium | 155,760 | 84,471 | 18,544 | 52,745* | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.6 | 35.7 | 31.4 | 42.9 |
P. orientale | 155,386 | 84,225 | 18,456 | 52,705* | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.5 | 43.0 |
P. prattii | 155,915 | 84,538 | 18,547 | 52,830 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.5 | 42.9 |
P. punctatum | 155,657 | 84,542 | 18,423 | 52,692 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.5 | 43.0 |
P. sibiricum1 | 155,514 | 84,537 | 18,415 | 52,562 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.7 | 43.0 |
P. sibiricum2 | 155,514 | 84,542 | 18,416 | 52,556 | 131 (113) | 85 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.7 | 43.0 |
P. sibiricum3 | 155,549 | 94,843 | 18,416 | 42,290 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 36.1 | 31.7 | 43.0 |
P. sibiricum4 | 155,512 | 84,533 | 18,417 | 52,562 | 131 (113) | 85 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.7 | 43.0 |
P. stenophyllum | 156,028 | 84,677 | 18,561 | 52,790 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.6 | 43.0 |
P. stewartianum | 155,867 | 84,540 | 18,559 | 52,768* | 131 (113) | 85 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.5 | 42.9 |
P. tessellatum1 | 155,688 | 84,488 | 18,564 | 52,636 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.6 | 35.7 | 31.5 | 42.9 |
P. tessellatum2 | 155,688 | 84,488 | 18,564 | 52,636 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.6 | 35.7 | 31.5 | 42.9 |
P. tessellatum3 | 155,724 | 84,485 | 18,497 | 52,742* | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.6 | 35.7 | 31.4 | 42.9 |
P. urceolatum | 155,504 | 84,492 | 18,435 | 52,577* | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.5 | 43.0 |
P. verticillatum1 | 155,589 | 84,242 | 18,523 | 52,824 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.6 | 42.9 |
P. verticillatum2 | 155,856 | 84,545 | 18,523 | 52,788 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.5 | 42.9 |
P. verticillatum3 | 155,505 | 84,207 | 18,468 | 52,830 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.5 | 42.9 |
P. yunnanense | 155,363 | 84,229 | 18,427 | 52,707* | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.6 | 43.0 |
P. zanlanscianense1 | 155,787 | 84,418 | 18,539 | 52,830 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.7 | 35.7 | 31.6 | 42.9 |
P. zanlanscianense2 | 155,911 | 84,650 | 18,431 | 52,830 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.6 | 35.6 | 31.5 | 42.9 |
P. zanlanscianense3 | 155,911 | 84,650 | 18,431 | 52,830 | 132 (113) | 86 (79) | 38 (30) | 8 (4) | 37.6 | 35.6 | 31.5 | 42.9 |
