Table 1 Summary of assembly results of 0 mM NaCl (CK1–3) and 400 mM NaCl (NaCl1–3) treated A. marina seedlings.

From: RNA-sequencing transcriptome analysis of Avicennia marina (Forsk.) Vierh. leaf epidermis defines tissue-specific transcriptional response to salinity treatment

Sample

Raw reads

Clean reads

Clean bases

Error (%)

Q20 (%)

Q30 (%)

GC (%)

CK1

47,111,632

45,354,800

6.80 G

0.03

97.88

93.60

45.67

CK2

42,521,038

41,760,254

6.26 G

0.02

98.24

94.65

44.81

CK3

42,912,590

39,835,844

5.98 G

0.02

98.37

95.05

47.34

NaCl1

45,312,506

41,977,602

6.30 G

0.02

98.19

94.57

45.66

NaCl2

45,829,168

37,687,002

5.65 G

0.02

98.64

95.64

46.82

NaCl3

42,980,148

40,348,190

6.05 G

0.02

98.20

94.65

46.24

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