Table 3 Correspondence between culture growth and the organisms detected by next-generation sequencing.
Organisms | Culture (N = 36) | mNGS (N = 59) | Culture vs mNGS (DT + SF)† | ||
|---|---|---|---|---|---|
DT* | SF* | DT* | SF* | ||
Staphylococcus aureus | 14 | 16 | 14 | 15 | 16/15 |
Staphylococcus epidermidis | 8 | 9 | 8 | 9 | 9/9 |
Escherichia coli | 5 | 3 | 8 | 7 | 5/8 |
Enterobacter cloacae | 2 | 1 | 3 | 4 | 2/5 |
Enterococcus faecalis | 2 | 1 | 2 | 2 | 2/3 |
Streptococcus sanguinis | 1 | 0 | 0 | 0 | 1/0 |
Klebsiella pneumoniae | 1 | 0 | 2 | 2 | 1/3 |
Candida albicans | 1 | 1 | 1 | 1 | 1/1 |
Pseudomonas aeruginosa | 0 | 0 | 4 | 3 | 0/4 |
Cutibacterium acnes | 0 | 0 | 1 | 2 | 0/3 |
Staphylococcus lentus | 0 | 0 | 2 | 1 | 0/2 |
Streptococcus pneumoniae | 0 | 0 | 2 | 1 | 0/2 |
Serratia marcescens | 0 | 0 | 1 | 2 | 0/2 |
Aspergillus flavus | 0 | 0 | 1 | 0 | 0/1 |
Staphylococcus warneri | 0 | 0 | 1 | 1 | 0/1 |
Staphylococcus capitis | 0 | 0 | 1 | 1 | 0/1 |
Streptococcus lactis | 0 | 0 | 1 | 1 | 0/1 |
Staphylococcus haemolyticus | 0 | 0 | 1 | 1 | 0/1 |
Staphylococcus cohnii | 0 | 0 | 1 | 1 | 0/1 |
Enterobacter hormaechei | 0 | 0 | 0 | 1 | 0/1 |
Finegoldia magna | 0 | 0 | 1 | 1 | 0/1 |
Anaerococcus prevotii | 0 | 0 | 1 | 1 | 0/1 |
Pseudomonas oleovorans | 0 | 0 | 0 | 1 | 0/1 |
Corynebacterium kutscher | 0 | 0 | 1 | 1 | 0/1 |
Streptococcus mitis | 0 | 0 | 1 | 1 | 0/1 |
Mycobacterium tuberculosis | 0 | 0 | 1 | 1 | 0/1 |
