Table 4 The chromosome-wise distribution of perfect, compound, and imperfect SSRs of Citrus maxima.
Chromosome | Total Mb | Perfect | Compound | Imperfect | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mono | di | tri | tetra | Penta | Hexa | Total | SSRs/Mb | Total | SSRs/Mb | Total | SSRs/Mb | ||
Chr-1 | 32.08 | 6804 | 2393 | 2105 | 972 | 315 | 130 | 12,719 | 396.46 | 526 | 16.40 | 53,001 | 1652.09 |
Chr-2 | 53.01 | 10,899 | 3812 | 3071 | 1512 | 518 | 214 | 20,026 | 377.80 | 768 | 14.49 | 84,595 | 1595.92 |
Chr-3 | 30.67 | 6553 | 2289 | 1949 | 964 | 291 | 141 | 12,187 | 397.42 | 517 | 16.86 | 51,422 | 1676.88 |
Chr-4 | 29.35 | 6229 | 2198 | 1940 | 860 | 286 | 145 | 11,658 | 397.27 | 449 | 15.30 | 47,472 | 1617.70 |
Chr-5 | 49.53 | 10,993 | 3973 | 3282 | 1593 | 508 | 239 | 20,588 | 415.67 | 843 | 17.02 | 82,977 | 1675.29 |
Chr-6 | 23.64 | 5552 | 1801 | 1558 | 697 | 239 | 125 | 9972 | 421.91 | 357 | 15.10 | 40,518 | 1714.29 |
Chr-7 | 22.27 | 5180 | 1860 | 1593 | 727 | 255 | 127 | 9742 | 437.47 | 372 | 16.70 | 38,278 | 1718.89 |
Chr-8 | 21.03 | 4841 | 1561 | 1357 | 659 | 206 | 91 | 8715 | 414.46 | 336 | 15.98 | 35,719 | 1698.68 |
Chr-9 | 40.40 | 7326 | 2361 | 2071 | 992 | 293 | 144 | 13,187 | 326.45 | 516 | 12.77 | 121,614 | 3010.58 |
Total | 301.96 | 64,377 | 22,248 | 18,926 | 8976 | 2911 | 1356 | 118,794 | 3584.90 | 4684 | 140.63 | 555,596 | 16,360.30 |
