Table 5 Distribution of three major classes of SSRs in different chromosomes of C. sinensis and C. maxima.
Chr | C. sinensis | C. maxima | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Class I | Class II | Class III | Total | Class I | Class II | Class III | Total | |||||||||||
Di | Tri | Tetra | Penta | Hexa | total | Di | Tri | Tetra | Penta | Hexa | total | |||||||
Chr-1 | 103 | 70 | 7 | 3 | 20 | 203 | 1007 | 1894 | 3104 | 220 | 100 | 19 | 9 | 25 | 373 | 1563 | 6239 | 8175 |
Chr-2 | 117 | 93 | 19 | 4 | 24 | 257 | 1134 | 2053 | 3444 | 297 | 157 | 29 | 25 | 33 | 541 | 2463 | 9982 | 12,986 |
Chr-3 | 104 | 66 | 9 | 8 | 16 | 203 | 974 | 1847 | 3024 | 178 | 104 | 5 | 6 | 22 | 315 | 1530 | 6018 | 7863 |
Chr-4 | 64 | 42 | 7 | 3 | 10 | 126 | 753 | 1276 | 2155 | 201 | 82 | 15 | 11 | 27 | 336 | 1345 | 5705 | 7386 |
Chr-5 | 103 | 106 | 12 | 9 | 27 | 257 | 1363 | 2339 | 3959 | 325 | 148 | 29 | 16 | 40 | 558 | 2646 | 10,241 | 13,445 |
Chr-6 | 53 | 42 | 5 | 5 | 8 | 113 | 762 | 1317 | 2192 | 179 | 76 | 9 | 11 | 28 | 303 | 1199 | 4938 | 6440 |
Chr-7 | 85 | 74 | 11 | 7 | 20 | 197 | 1232 | 2134 | 3563 | 167 | 85 | 8 | 5 | 22 | 287 | 1288 | 4796 | 6371 |
Chr-8 | 56 | 46 | 4 | 6 | 15 | 127 | 701 | 1318 | 2146 | 124 | 69 | 5 | 8 | 11 | 217 | 1040 | 4416 | 5673 |
Chr-9 | 58 | 39 | 6 | 4 | 11 | 118 | 671 | 1208 | 1997 | 224 | 111 | 14 | 18 | 24 | 391 | 1469 | 6636 | 8496 |
Total | 743 | 578 | 80 | 49 | 151 | 1601 | 8597 | 15,386 | 25,584 | 1915 | 932 | 133 | 109 | 232 | 3321 | 14,543 | 58,971 | 76,835 |