Table 9 Total germplasm used in this study.

From: Comprehensive genome-wide identification and transferability of chromosome-specific highly variable microsatellite markers from citrus species

S. no.

Common name

Parentage

Scientific name

S. No.

Common name

Parentage

Scientific name

1

Clementina Type 3*

Mandarin × Sour orange

C. clementina Hort.ex Tanaka

24

China citrus

  

2

W. Murcott Type 3*

Seedling selection of Murcott

 

25

Temple

Natural selection

C. reticulata Blanco

3

Marisol

Mutation of 'Oroval' clementine

C. clementina hort. ex Tanaka

26

Sampson (Tangelo)

Grapefruit × Dancy tangerine

 

4

Bower

Clementine mandarin × Orlando tangelo

 

27

Minneola (Tangelo)

Duncan grapefruit × Dancy mandarin

C. reticulata Blanco

5

King Type 3*

Natural tangor

C. nobilis Lour

28

Pearl (Tangelo)

Imperial grapefruit × Willow leaf mandarin

 

6

Kishu small tangerine

 

C. kinokuni Hort. ex. Tanaka mukakukishu

29

Darjeeling mandarin

Natural selection

C. reticulata Blanco

7

Kara

King tangor × Ovari satsuma

 

30

Khasi mandarin

Natural selection

C. reticulata Blanco

8

Kinnow

C. nobilis Lour × C. deliciosa Tenora

C. reticulata Blanco

31

Coorg mandarin

Natural selection

C. reticulata Blanco

9

PAU Kinnow-1

(Induced low seeded mutant of Kinnow)

C. reticulata Blanco

32

CRS- 4 mandarin

(Selection from Coorg mandarin)

C. reticulata Blanco

17

Honey mandarin

C. nobilis Lour × C. deliciosa Tenora

 

33

Nagpur mandarin

Natural selection

C. reticulata Blanco

19

Wilking Type 3

King × Willow leaf

 

34

Nagpur seedless mandarin

(Seedless selection from Nagpur mandarin)

C. reticulata Blanco

10

Willow*

 

C. deliciosa Tenora

35

Mudkhed mandarin

(Low seeded selection from Nagpur mandarin)

C. reticulata Blanco

11

Dancy tangerine

Chance seedling, Natural selection

C. reticulata Blanco, C. tangerina Tanaka

36

Queen

 

C. sinensis (L.) Osbec kunshiu

12

Daisy tangerine

Fortune × Fremont mandarin

 

37

Moro Blood

 

C. sinensis (L.) Osbeck

13

Fremont mandarin

Clementina × Ponkan Mandarin

C. reticulata Blanco

38

Tarocco Blood orange

 

C. sinensis (L.) Osbeck

14

Nova mandarin

 

C. reticulata Blanco

39

Sanguinello Blood orange

 

C. sinensis (L.) Osbeck

15

Fairchild

Clementine mandarin × Orlando tangelo

C. reticulata Blanco

40

Ruby Nucellar (RN)

 

C. sinensis (L.) Osbeck

16

Fortune

Clementine mandarin × Orlando tangelo

C. reticulata Blanco

41

Cara Cara Navel

 

C. sinensis (L.) Osbeck

18

Michal

Natural hybrid of Clementina × Dancy

 

42

Newhall Navel

 

C. sinensis (L.) Osbeck

20

Feutrell’s Early

Clementine mandarin × orlando tangelo

C. reticulata Blanco

43

Washington navel orange

 

C. sinensis (L.) Osbeck

21

Sunburst tangerine

Robinson mandarin × Osceola mandarin

 

44

Jaffa

 

C. sinensis (L.) Osbeck

22

Okitsu*

 

C. unshiu Marcovitch

45

Pineapple

 

C. sinensis (L.) Osbeck

23

Ovari

 

C. unshiu Marcovitch

46

Trovita

 

C. sinensis (L.) Osbeck

47

Shamouti

 

C. sinensis (L.) Osbeck

74

Ray Ruby

 

C. paradisi Macfadyen

48

Kodur Sathgudi

 

C. sinensis (L.) Osbeck

75

Red Blush

 

C. paradisi Macfadyen

49

Valencia*

 

C. sinensis (L.) Osbeck

76

Rio Red*

 

C. paradisi Macfadyen

50

Campbell Valencia

 

C. sinensis (L.) Osbeck

77

Star Ruby

 

C. paradisi Macfadyen

51

Mid Knight Valencia

 

C. sinensis (L.) Osbeck

78

Foster (Foster pink)

 

C. paradisi Macfadyen

52

Olinda old

 

C. sinensis (L.) Osbeck

79

Marsh

Chance seedling

C. paradisi Macfadyen

53

Cutter Valencia

 

C. sinensis (L.) Osbeck

80

Duncan

 

C. paradisi Macfadyen

54

Delta Valencia

 

C. sinensis (L.) Osbeck

81

RGC-9

  

55

Lane late

 

C. sinensis (L.) Osbeck

82

RGC-7

  

56

Rodhe Red

 

C. sinensis (L.) Osbeck

83

RGC-1

  

57

Early gold

Citrus × aurantium L

C. sinensis (L.) Osbeck

84

Ches White Pummelo

 

C. maxima (Burm.) Merr

58

Itaboria

 

C. sinensis (L.) Osbeck

85

Devanahalli

 

C. maxima (Burm.) Merr

59

Westin

 

C. sinensis (L.) Osbeck

86

Ches Pink Pummelo

 

C. maxima (Burm.) Merr

60

Mosambi

 

C. sinensis (L.) Osbeck

87

Pink Pummelo*

 

C. maxima (Burm.) Merr

61

Phule Mousambi

 

C. sinensis (L.) Osbeck

88

White Pummelo

 

C. maxima (Burm.) Merr

62

M-3

 

C. sinensis (L.) Osbeck

89

Seed less white (Pummelo)

 

C. maxima (Burm.) Merr

63

M-4

 

C. sinensis (L.) Osbeck

90

Seed star Pummelo

 

C. maxima (Burm.) Merr

64

M-8

 

C. sinensis (L.) Osbeck

91

NRCC P-1

Clone of pummelo

C. maxima (Burm.) Merr

65

Crescent orange

 

C. sinensis (L.) Osbeck

92

NRCC P-2

Clone of pummelo

C. maxima (Burm.) Merr

66

Fucumoto Marvel

 

C. sinensis (L.) Osbeck

93

NRCC P-3

Clone of pummelo

C. maxima (Burm.) Merr

67

Vernia

 

C. sinensis (L.) Osbeck

94

NRCC P-4

Clone of pummelo

C. maxima (Burm.) Merr

68

Blood red

 

C. sinensis (L.) Osbeck

95

NRCC P-5

Clone of pummelo

C. maxima (Burm.) Merr

69

Fischier

  

96

PTF-1

Clone of pummelo

C. maxima (Burm.) Merr

70

Tinsula sweet orange

  

97

PTF-2

Clone of pummelo

C. maxima (Burm.) Merr

71

RGC-4

  

98

PTF-3

Clone of pummelo

C. maxima (Burm.) Merr

72

Ruby Red

  

99

PTF-4

Clone of pummelo

C. maxima (Burm.) Merr

73

Flame grapefruit

 

C. paradisi Macfadyen

100

Chakotra Local

 

C. maxima (Burm.) Merr

101

Muscat Pummelo

 

C. maxima (Burm.) Merr

126

Katazamir

 

C. jambhiri Lush

102

Tinshukhia

Pummelo × Sweet orange hybrid

 

127

Chetali Rough lemon

 

C. jambhiri Lush

103

Gou Tou Cheng

 

Citrus × aurantium

128

Thailand Rough lemon

 

C. jambhiri Lush

104

Marmalade

Citrus maxima and Citrus reticulata

C. aurantium L

129

Florida Rough Lemon

 

C. jambhiri Lush

105

South Africa Sour Orange

 

C. aurantium L

130

Brazil Rough lemon

  

106

Smooth Flat Seville

C. maxima × C. reticulata

C. aurantium L

131

Abohar Rough lemon

  

107

Sour orange*

 

C. aurantium

132

Baduvapuli lemon

NBPGR, New Delhi, India

 

108

Mexican Lime

micrantha × citron

C. aurantifolia (Christm.) Swingle

133

South African Rough lemon

  

109

Persian Lime

 

C. latifolia (Yu. Tanaka) Tanaka

134

Rubidoux*

 

P. trifoliata (L.) Raf

110

Bears Lime

 

C. latifolia (Yu. Tanaka) Tanaka

135

Chetali trifoliate orange

 

P. trifoliata (L.) Raf

111

Lisbon lemon

  

136

Gonicoppal trifoliate

 

P. trifoliata (L.)Raf

112

Kagzi Lime*

 

C. aurantifolia Balanco

137

Swingle citrumelo

Duncan grapefruit × P. trifoliata

X Citroncirus spp. RUTACEAE

113

Sweet Lime*

 

C. limettioides

138

Sacaton citrumelo

P. trifoliata × C. paradisi

X Citroncirus spp.

114

Baramasi Lemon*

 

C. limon (L.) Burm

139

Carrizo

'Washington' sweet orange × P. trifoliata

X Citroncirus sp. RUTACEAE

115

Eureka lemon

sour orange × citron

C. limon (L.) Burm

140

Kurshashke citrange

  

116

Indian meyer lemon

Citrus × meyeri

C. limon (L.) Burm

141

X-639

Cleopatra mandarin × P. trifoliata

X Citroncirus spp. RUTACEAE

117

Limoneriaassam

  

142

C-32

Ruby' orange x 'Webber-Fawcett' trifoliate

X Citroncirus spp.

118

Baramasi lemon

 

C. limon (L.) Burm

143

Benton

Ruby Blood sweet orange × P. trifoliata

X Citroncirus spp. RUTACEAE

119

Bhardi lemon

  

144

C-35 J

Ruby' orange x 'Webber-Fawcett' trifoliata

X Citroncirus spp.

120

Rough lemon local*

 

C. jambhiri Lush

145

U- 852

C. reticulate ‘Changsha’ × P. trifoliata

 

121

Schaub Rough lemon

 

C. jambhiri Lush

146

Rich 16–6

 

P. trifoliata (L.) Raf

122

Hayer Rough Lemon

 

C. jambhiri Lush

147

NRCC 1

Rough lemon × Troyer citrange

 

123

14–9-13 Rough lemon

 

C. jambhiri Lush

148

NRCC 3

Rough lemon × Troyer citrange

 

124

Florida Rough lemon

 

C. jambhiri Lush

149

NRCC 4

Rough lemon × trifoliate orange

 

125

Karna khatta Rough lemon

 

C. kharna

150

NRCC 5

Rough lemon × trifoliate orange

 

151

Norneo Rangpur lime

 

C. limonia osbeck

167

Narangi (Garden)

  

152

Nornia Rangpur lime

 

C. limonia osbeck

168

RGC-2

  

153

Texas Rangpur Lime

 

C. limonia osbeck

169

Miami Kumquat

 

Fortunella margarita (Lour.)

154

Rangpur Lime J*

  

170

Alemow*

C. macrophylla

C. macrophylla Wester

155

Chetalli Rangpur Lime

 

C. limonia osbeck

171

Indian wild orange*

C. indica

C. indica

156

Brazalian Rangpur Lime

 

C. limonia osbeck

172

Citron*

 

C. macroptera

157

South African Rangpur lime

 

C. limonia osbeck

173

Etrog*

 

C. medica L

158

Gonicoppal Rangpur Lime

 

C. limonia osbeck

174

Cleminula species (clementina)

  

159

Australia Sour trifoliate

  

175

Sadaphal species

  

160

Volkameriana

Sour mandarin × citron

C. volkameriana

176

Gajanima species

  

161

Cleopatra*

Open pollinated seedling

C. reshni Hort.ex Tanaka

177

Calamondin*

(Fortunella × C. reticulata

C. madurensis Lour

162

Pectinifera

 

C. depressa

178

RGC-3

  

163

San Chu Sha*

 

C. reticulata Blanco

179

RGC-5

  

164

Kinkoji

Graft hybrid of C. obovoidea + Satsuma

C. obovoidea Takahashi

180

RGC-6

  

165

Chinotto*

 

C. myrtifolia Rafinesque

181

RGC-8

  

166

Fortunella*

 

Fortunella hindsii Champ. Ex Benth