Table 3 Relative energies of the local DFT minima in kJ/mol, defined as the difference between the L and S structures for the same redox state (i.e. E(S)—E(L)). All structures were optimized by the QM/MM method at the TPSS/def2-SV(P) level of theory. The other results are single-point calculations on these using other DFT methods (B3LYP), basis sets (def2-TZVPD), or with a COSMO continuum solvation model at dielectric constants of 4, 20, and 80.
From: Two local minima for structures of [4Fe–4S] clusters obtained with density functional theory methods
QM/MM | COSMO-TPSS/def2-SV(P) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
TPSS/def-SV(P) | B3LYP/def2-SV(P) | TPSS/def2-TZVPD | ε = 4 | ε = 20 | ε = 80 | |||||||
Ox | Red | Ox | Red | Ox | Red | Ox | Red | Ox | Red | Ox | Red | |
4Fd1 | 27.0 | 26.0 | 88.2 | 91.2 | 17.3 | 29.4 | 27.0 | 25.0 | 26.1 | 23.1 | 25.9 | 22.7 |
4Fd2 | 28.9 | 27.8 | 86.0 | 88.8 | 12.3 | 27.3 | 28.2 | 29.1 | 27.7 | 28.4 | 27.5 | 28.4 |
4Fd3 | 29.7 | 30.0 | 87.6 | 91.0 | 12.0 | 14.8 | 27.6 | 27.1 | 27.2 | 25.8 | 27.1 | 25.5 |
Hip1 | 18.8 | 22.3 | 151.1 | 93.6 | 2.2 | 42.7 | 18.3 | 22.0 | 18.2 | 21.4 | 18.2 | 21.2 |
Hip2 | 20.1 | 22.9 | 158.8 | 93.6 | 22.7 | 26.8 | 22.5 | 23.8 | 22.3 | 23.0 | 22.3 | 22.9 |