Table 2 Sample demographics for all samples used in topic modeling and differential abundance approaches.

From: Topic modeling for multi-omic integration in the human gut microbiome and implications for Autism

 

n_samples

n_ASD

n_TD

n_individuals

16s, used for topic modeling

456

228

228

152

MTG, used for topic modeling

193

98

95

186

MTT, used for topic modeling

178

89

89

178

MBX, used for topic modeling

175

87

88

175

81 all-inclusive samples, used for differential abundance testing

81

42

39

81

Cluster1

39

21

18

39

Cluster2

42

21

21

42

  1. 81 samples had all four omics measured on the fecal samples. Remaining samples were collected as part of the same study, but had one or more omics missing.
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