Table 1 Mycobacterium tuberculosis dataset.
Characteristic | No. members* | N (/28,128) | % | N (/24,661)** | % | |
|---|---|---|---|---|---|---|
Lineage | 1 | 15 | 2868 | 10.1 | 2145 | 8.7 |
2 | 5 | 7357 | 25.9 | 7252 | 29.4 | |
3 | 7 | 3195 | 11.2 | 2642 | 10.7 | |
4 | 52 | 14,298 | 50.3 | 12,128 | 49.2 | |
5 | 9 | 230 | 0.8 | 143 | 0.6 | |
6 | 10 | 128 | 0.5 | 78 | 0.3 | |
7 | 1 | 52 | 0.2 | 44 | 0.2 | |
Bovis | 1 | 308 | 1.1 | 229 | 0.9 | |
Spoligotype | Beijing | 30 | 7197 | 25.3 | 7167 | 29.1 |
T | 304 | 5223 | 18.4 | 4829 | 19.6 | |
LAM | 187 | 3672 | 12.9 | 3434 | 13.9 | |
Unknown | 1827 | 3318 | 11.7 | 1002 | 4.1 | |
CAS | 125 | 2641 | 9.3 | 2487 | 10.1 | |
EAI | 207 | 2328 | 8.2 | 2061 | 8.4 | |
X | 59 | 992 | 3.5 | 935 | 3.8 | |
H | 92 | 959 | 3.4 | 827 | 3.4 | |
S | 30 | 748 | 2.6 | 709 | 2.9 | |
Ural | 38 | 458 | 1.6 | 414 | 1.7 | |
Bovis | 32 | 267 | 0.9 | 229 | 0.9 | |
AFRI | 30 | 205 | 0.7 | 173 | 0.7 | |
Other | 28 | 422 | 1.5 | 394 | 1.6 | |
WHO region | Europe | 36 | 10,375 | 36.5 | 8690 | 35.2 |
Africa | 30 | 6162 | 21.7 | 5582 | 22.6 | |
Western Pacific | 8 | 3971 | 14 | 3590 | 14.6 | |
Americas | 14 | 3298 | 11.6 | 2996 | 12.1 | |
Unknown | - | 2227 | 7.8 | 1933 | 7.8 | |
Southeast Asia | 7 | 1878 | 6.6 | 1606 | 6.5 | |
Eastern Mediterranean | 11 | 525 | 1.8 | 264 | 1.1 | |
