Table 1 DNA sequences used in this study (5ʹ–3ʹ).

From: Theranostic approach to specifically targeting the interloop region of BCL2 i-motif DNA by crystal violet

Name

Category

Sequence

C9ORF72 iM

Class I i-motif

GGCCCCGGCCCCGGCCCCGGCCCC

hTelo iM

Class I i-motif

CCCTAACCCTAACCCTAACCCTAA

HRAS iM1

Class I i-motif

CCCCCGCCCCCGCCCCGCCCCG

HRAS iM2

Class I i-motif

CCCCCGCCCCCGCCCCGCCCCGGCCTCG

ILPR iM

Class I i-motif

CCCCACACCCCTGTCCCCACACCCC

VEGF iM

Class I i-motif

GACCCCGCCCCCGGCCCGCCCCGG

BCL2 iM

Class II i-motif

CAGCCCCGCTCCCGCCCCCTTCCTCCCGCGCCCGCCCCT

HIF-1α iMa

Class II i-motif

CGCGCTCCCGCCCCCTCTCCCCTCCCCGCGC

JAZF1 iMa

Class II i-motif

CCCCCCCCGCCCCCGCCCCCGCCCTCCCCCC

KRAS mid iM

Class II i-motif

GCCCGGCCCCCGCTCCTCCCCCGCCGGCCCGGCCCGGCCCCCTCCTTCTCCCCG

KRAS mid I-IV iM

Class II i-motif

GCCCGGCCCCCGCTCCTCCCCCGCCGGCCCGG

PDGF-A iM

Class II i-motif

CCGCGCCCCTCCCCCCGCCCCCCGCCCCCCGCCCCCCCCCCCCC

C3T555 iM

Class II i-motif

CCCTTTTTCCCTTTTTCCCTTTTTCCC

C3T666 iM

Class II i-motif

CCCTTTTTTCCCTTTTTTCCCTTTTTTCCC

C3T777 iM

Class II i-motif

CCCTTTTTTTCCCTTTTTTTCCCTTTTTTTCCC

C3T888 iM

Class II i-motif

CCCTTTTTTTTCCCTTTTTTTTCCCTTTTTTTTCCC

BCL2 G4

Parallel G4

AGGGGCGGGCGCGGGAGGAAGGGGGCGGGAGCGGGGCTG

hTelo G4

Hybrid G4

AGGGTTAGGGTTAGGGTTAGGG

MYC G4

Parallel G4

TGAGGGTGGGTAGGGTGGGTAA

TBA G4

Anti-parallel G4

GGTTGGTGTGGTTGG

VEGF G4

Parallel G4

GGGGCGGGCCGGGGGCGGGG

Hairpin (H2)

Hairpin

CTATCGGACTTCGGTCCGATAG

H3

G-rich non-G4

AGGGTTAGGGTTAGGGTT

R1

Random sequence

TTGCCTTGCTGCTCTACCTCCA

C29 iM

Reference sequence

CCCCCTTTCCCCCTTTCCCCCTTTCCCCC

CV30S

Reference sequence

AACGACCACCGGTGCGCCGTACAGGTAACTAGCGTCGTCGTT

  1. aAlthough we are considering them as class II i-motifs, the potential arrangement of the loop regions of the HIF-1α and JAZF1 i-motifs is not available. Therefore, they can be considered as class I i-motifs depending on the loop arrangements5.
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