Figure 2
From: Identification of tumor-related genes via RNA sequencing of tumor tissues in Xenopus tropicalis
Hierarchical clustering of all analyzed tumors in Xenopus and DEGs of TT-body1-3 vs TI-leg1-3. (a) Hierarchical clustering of 12 analyzed samples. Difference of the expression patten among the samples was indicated with a tree diagram. (b) Schematic diagram of extraction of differentially expressed genes (DEGs) in Xenopus, which we analyzed in this study. (c,d) Schematic diagram of DEGs extraction (TT-body1-3 vs TI-leg1-3) (c) and the MA plot (d). Green dots indicate DEGs with statistical significance (FDR < 0.05) in (d). (e,f) Schematic diagram of DEGs extraction (NI-body1-3 vs NI-leg1-3) (e), and the MA plot (f). Orange dots indicate DEGs with statistical significance (FDR < 0.05) in (f). (g) Venn diagram showing DEG3. DEG3 is DEG1—DEG1 ∩ DEG2.
