Figure 1

Gene presence-absence matrix from pangenome analysis of 83 isolates of Lonsdalea quercina populations collected in California (CA) and Colorado (CO), USA. Each column indicates a gene (blue—present, yellow—absent), each row represents a gene profile of each isolate. Host species, habitat, and state from which each isolate was collected are color coded according to the legend. Pangenome analysis was conducted with Roary v.3.13.0.