Table 3 Validation of top 20 hub genes: by utilizing the p value from PrognoScan and Oncolnc and Fp Class scores.
hub mRNA | PrognoScan | Oncolnc | Fp class | |||
|---|---|---|---|---|---|---|
Co-expressed gene symbol | Total score | Gene co-expression score | Network topology score | |||
BIRC5 | 0.000296436 | 0.07 | NUSAP1 | 0.9429 | 0.9423 | 0 |
STAT3 | 0.0027682 | 0.1 | SOD2 (Superoxide dismutase [Mn], mitochondrial) | 0.5549 | 0.527 | 0 |
MAPK1 | 9.00E-06 | 0.5 | KCTD20 | 0.4916 | 0.4457 | 0 |
TGFB1 | 0.000147159 | 0.03 | FURIN | 0.4944 | 0.1083 | 0 |
MMP2 | 0.00829304 | 1 | COL1A2 | 0.8826 | 0.8801 | 0 |
EGFR | 3.39E-05 | 0.3 | FBLN1 | 0.8117 | 0.6334 | 0 |
ENAH | 0.00351316 | 0.5 | PTK2 | 0.2609 | 0.1297 | 0 |
GJA1 | 0.000256725 | 0.04 | SPARC | 0.7426 | 0.731 | 0 |
CXCL12 | 3.02E-05 | 0.3 | DCN | 0.8826 | 0.8436 | 0 |
YAP1 | 2.71E-05 | 0.3 | ID1 | 0.803 | 0.0741 | 0 |
ICAM1 | 0.00176679 | 0.03 | SOD2 (Superoxide dismutase [Mn], mitochondrial) | 0.5027 | 0.4925 | 0 |
