Table 5 MM/GBSA profiles of the complex, maesopsin 6-O-glucoside with the accessory gene regulator protein A.

From: Phytochemical analysis, biological activities of methanolic extracts and an isolated flavonoid from Tunisian Limoniastrum monopetalum (L.) Boiss: an in vitro and in silico investigations

Time (ns)

ΔG bind (kcal/mol)

ΔG bind Coulomb (kcal/mol)

ΔG bind covalent (kcal/mol)

ΔG bind Vander (kcal/mol)

ΔG bind H Bond (kcal/mol)

ΔG bind Lipophilic (kcal/mol)

ΔG binding SolvGB (kcal/mol)

0

−63.52

−54.80

6.83

−49.24

−4.38

−10.23

49.43

100

−47.70

−19.57

2.32

−47.18

−2.03

−11.43

30.90

200

−37.98

−10.90

4.86

−46.99

−1.78

−11.44

28.61

300

−42.63

−24.15

2.87

−36.48

−1.94

−9.67

27.02

400

−40.21

−29.29

7.42

−43.92

−3.95

−8.43

38.18

500

−42.73

−16.63

4.71

−46.00

−2.67

−11.43

29.30

600

−43.27

−14.24

4.23

−46.73

−2.24

−12.31

28.33

700

−47.61

−23.88

3.93

−42.46

−3.49

−11.88

30.57

800

−54.85

−22.52

6.15

−49.39

−3.20

−12.10

28.10

900

−42.84

−24.54

2.67

−43.48

−2.66

−10.84

37.18

1000

−33.82

−23.21

1.77

−40.06

−2.08

−9.96

40.58

Avg

−45.20

−23.98

4.34

−44.72

−2.77

−10.88

33.47

  1. ΔG bind free energy of binding, ΔG bind Coulomb Coulomb energy, ΔG bind covalent covalent energy (internal energy), ΔG bind Vander van der Waals energy, ΔG bind H bond hydrogen bonding energy, ΔG bind lipophilic hydrophobic energy (non-polar contribution estimated by solvent accessible surface area).