Table 4 HLA alleles identified by the HLA association analysis of the COVID-19 vaccine adverse events.

From: A web-based genome-wide association study reveals the susceptibility loci of common adverse events following COVID-19 vaccination in the Japanese population

Reaction

HLA allele

Dose

BNT162b1 vaccine

mRNA-1273 vaccine

AF

OR

P

AF

OR

P

Pain in vaccination site

DQA1*01:01

1st

0.1

1.04

0.917

0.09

3.58

0.0002932

2nd

0.09

1.72

0.2394

0.09

1.22

0.3588

Pain in vaccination site

DQB1*05:01

1st

0.1

1.15

0.3469

0.08

3.05

0.000443

2nd

0.06

1.27

0.1741

0.08

1.33

0.1802

Swelling of lymph nodes (especially neck, armpit, inguinal part)

B*15:02

1st

0.12

4.35

0.00008469

NA

NA

NA

2nd

NA

NA

NA

NA

NA

NA

37.5 °C or higher fever

DPB1*09:01

1st

0.15

0.84

0.383

0.1

0.97

0.8852

2nd

0.15

0.65

0.0003488

0.1

1.04

0.8483

37.5 °C or higher fever

B*40:06

1st

0.07

1.03

0.8866

0.06

1.22

0.4482

2nd

0.13

0.67

0.0002165

0.06

0.84

0.5695

37.5 °C or higher fever

DQB1*06:01

1st

0.19

1.11

0.7392

0.21

0.87

0.2867

2nd

0.13

0.62

0.000009773

0.21

0.9

0.4149

37.5 °C or higher fever

DRB1*11:01

1st

0.07

0.52

0.04899

NA

NA

NA

2nd

0.14

0.63

0.0001659

NA

NA

NA

37.5 °C or higher fever

DQA1*06:01

1st

NA

NA

NA

NA

NA

NA

2nd

0.2

0.7

0.00007333

NA

NA

NA

Muscle pain

DRB1*11:01

1st

0.07

0.79

0.3191

NA

NA

NA

2nd

0.14

0.47

0.0002821

NA

NA

NA

Limb pain

DQA1*05:03

1st

NA

NA

NA

NA

NA

NA

2nd

0.07

3.27

0.0004283

NA

NA

NA

Sneeze

A*11:01

1st

0.08

6.86

0.0003181

0.09

5.53

0.0124

2nd

0.11

1.53

0.5975

0.09

1.38

0.7743

Muscle weakness

DQB1*03:01

1st

0.1

1.85

0.5959

0.12

5.95

0.1866

2nd

0.08

1.13

0.8376

0.11

4.42

0.0001313

Sleepy in the daytime

B*15:35

1st

NA

NA

NA

NA

NA

NA

2nd

0.12

1.74

0.0003864

NA

NA

NA

There is nothing that applies in this (systemic reaction)

DQA1*01:02

1st

0.21

1.57

0.05491

0.19

1.7

0.000006869

2nd

0.21

1

0.9944

0.18

1.09

0.7831

Chills (pathological)

DQA1*03:01

1st

0.15

0.95

0.8494

0.1

0.9

0.7486

2nd

0.12

1.39

0.02235

0.1

1.83

0.0005086

  1. HLA alleles achieving p < 5.26 × 10−4 (0.05/95) at the 1st or 2nd dose of the BNT162b1 or mRNA-1273 vaccines.
  2. AF, allele frequency; OR, odds ratio of allele; P, p-value.
  3. Significant values are in bold.