Table 3 The significantly enriched GO pathways.

From: Transcriptomic and metabolomic analyses reveal that ABA increases the salt tolerance of rice significantly correlated with jasmonic acid biosynthesis and flavonoid biosynthesis

Combination

Category

GO ID

Description

Q-value

ZCK vs. ZS

MF

GO:0004568

Chitinase activity

0.007

GO:0004072

Aspartate kinase activity

0.030

BP

GO:0000272

Polysaccharide catabolic process

0.006

GO:0006032

Chitin catabolic process

0.006

GO:0006952

Defense response

0.006

GO:0009620

Response to fungus

0.006

GO:0010200

Response to chitin

0.006

GO:0010438

Cellular response to sulfur starvation

0.006

GO:0009090

Homoserine biosynthetic process

0.011

GO:0050832

Defense response to fungus

0.011

GO:0010439

Regulation of glucosinolate biosynthetic process

0.012

GO:0009617

Response to bacterium

0.015

GO:0009088

Threonine biosynthetic process

0.022

GO:0009751

Response to salicylic acid

0.025

GO:0009814

Defense response, incompatible interaction

0.030

GO:0009089

Lysine biosynthetic process via diaminopimelate

0.036

GO:0010104

Regulation of ethylene-activated signaling pathway

0.042

GO:0034488

Basic amino acid transmembrane export from vacuole

0.048

GO:1900706

Positive regulation of siderophore biosynthetic process

0.048

ZS vs. ZSA

CC

GO:0005576

Extracellular region

8.16E-06

GO:0031225

Anchored component of membrane

0.050

GO:0042764

Ascospore-type prospore

0.050

GO:0046658

Anchored component of plasma membrane

0.050

GO:0048046

Apoplast

0.050

MF

GO:0003700

DNA-binding transcription factor activity

1.82E-04

GO:0004568

Chitinase activity

5.66E-04

GO:0004867

Serine-type endopeptidase inhibitor activity

0.002

GO:0052716

Hydroquinone:oxygen oxidoreductase activity

0.002

GO:0004364

Glutathione transferase activity

0.014

GO:0015152

Glucose-6-phosphate transmembrane transporter activity

0.014

GO:0016298

Lipase activity

0.014

GO:0004601

Peroxidase activity

0.017

GO:0042973

Glucan endo-1,3-beta-D-glucosidase activity

0.018

GO:0102336

3-oxo-arachidoyl-CoA synthase activity

0.018

GO:0102337

3-oxo-cerotoyl-CoA synthase activity

0.018

GO:0102338

3-oxo-lignoceronyl-CoA synthase activity

0.018

GO:0102756

Very-long-chain 3-ketoacyl-coa synthase activity

0.018

GO:0043565

Sequence-specific dna binding

0.026

GO:0009055

Electron transfer activity

0.030

GO:0030170

Pyridoxal phosphate binding

0.035

GO:0015120

Phosphoglycerate transmembrane transporter activity

0.044

GO:0071917

Triose-phosphate transmembrane transporter activity

0.044

GO:0020037

Heme binding

0.045

GO:0004322

Ferroxidase activity

0.045

BP

GO:0010200

Response to chitin

8.59E-05

GO:0009643

Photosynthetic acclimation

0.007

GO:0031640

Killing of cells of other organism

0.007

GO:0050832

Defense response to fungus

0.007

GO:2000022

Regulation of jasmonic acid mediated signaling pathway

0.007

GO:0046274

Lignin catabolic process

0.008

GO:0000272

Polysaccharide catabolic process

0.008

GO:0006979

Response to oxidative stress

0.008

GO:0006032

Chitin catabolic process

0.010

GO:0042744

Hydrogen peroxide catabolic process

0.010

GO:0071456

Cellular response to hypoxia

0.010

GO:0006749

Glutathione metabolic process

0.010

GO:0009416

Response to light stimulus

0.010

GO:0015713

Phosphoglycerate transmembrane transport

0.010

GO:0015760

Glucose-6-phosphate transport

0.010

GO:0009695

Jasmonic acid biosynthetic process

0.010

GO:0006561

Proline biosynthetic process

0.016

GO:0006587

Serotonin biosynthetic process from tryptophan

0.016

GO:0006805

Xenobiotic metabolic process

0.016

GO:0010438

Cellular response to sulfur starvation

0.016