Table 4 The common significantly differentially expressed genes between subtype \(C\) and the other subtypes are documented in the set \(Bio\_DEG^{C}\) as the potential genes for biomarkers.
From: Exploring ceRNA networks for key biomarkers in breast cancer subtypes and immune regulation
Subtype \(C\) | \(Bio\_DEG^{C}\) | avg_|logFC| | std_|logFC| | avg_FDR | std_FDR |
|---|---|---|---|---|---|
Basal-like | circ_001845 | 0.909275 | 0.131957831 | 0.0234475 | 0.025229302 |
circ_001124 | 0.855975 | 0.232192239 | 0.024875 | 0.025912079 | |
circ_003925 | 0.76815 | 0.001815673 | 0.0158925 | 0.023758302 | |
circ_000736 | 0.710225 | 0.107696406 | 0.028525 | 0.025866758 | |
circ_003996 | 0.762175 | 0.001776467 | 0.0158875 | 0.023748417 | |
Luminal B | circ_00306 | 0.928925 | 0.214181813 | 0.0132075 | 0.025267296 |
circ_00128 | 1.0188 | 0.126878236 | 0.0096 | 0.013684541 | |
Normal-like | circ_000709 | 0.80905 | 0.012791794 | 0.009645 | 0.007470718 |
NPHS1 | 0.717425 | 0.177538191 | 0.0218425 | 0.021153169 | |
Luminal A | CAMKV | 0.93575 | 0.467635994 | 0.0137 | 0.019086994 |
circ_001855 | 0.5703 | 0.014347822 | 0.0448 | 0.02248733 | |
HER2+ | circ_00128 | 1.79915 | 0.523564581 | 0.003755 | 0.007230682 |
circ_00173 | 1.85335 | 0.351477837 | 0.0001825 | 0.000279568 |
