Table 5 Total number of positions and percentage similarity of the investigated genomes with reference genome in SNP tree.

From: Emergence of multidrug resistant, ctx negative seventh pandemic Vibrio cholerae O1 El Tor sequence type (ST) 69 in coastal water of Kerala, India

File

Valid positions

Percentage similarity

Vibrio cholerae MJ-1236 complete sequence NC_012668.1/CP001486.1

4,009,762

99.41

V. cholerae strain 2012Env-9 complete sequence CP012997.1/CP012998.1)

3,819,080

94.68

V. cholerae strain V060002 chromosome, complete genome NZ_AP018677.1

4,050,964

100

VC6

3,984,098

98.77

V. cholerae M66-2 complete sequence NC_012578.1/NC- 012,580.1

3,943,936

97.78

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