Table 1 Enzymes of the model.

From: Simulated digestions of free oligosaccharides and mucin-type O-glycans reveal a potential role for Clostridium perfringens

Enzyme no

EC number

Short name

Accepted name

CAZy families

Rhea ID

1

EC 3.2.1.18

exo-αSiaH

exo-α-sialidase

GH33,34,83, 177,181

2

EC 3.2.1.22

αGalH

α-galactosidase

GH4,27,31, 36,57,97,110

21,112

3

EC 3.2.1.23

βGalH

β-galactosidase

GH1,2,3,5,16,35,42,50,54,147,165,173

4

EC 3.2.1.49

αGalNAcH

α-N-acetylgalactosaminidase

GH27,36,109,129

15,085

5

EC 3.2.1.50

αGlcNAcH

α-N-acetylglucosaminidase

GH89

6

EC 3.2.1.51

αFucH

α-l-fucosidase

GH29,95,151

12,288

7

EC 3.2.1.52

βHexNAcH

β-N-acetylhexosaminidase

GH2,3,18,20,84,179

8

EC 3.2.1.97

endo-αGalNAcH

endo-α-N-acetylgalactosaminidase

GH101

30,983/54,540

9

EC 3.1.6.-

exo-sulfoH

(3S/4S/6S-Gal/GlcNAc sulfatase)

10

EC 3.2.1.63

α2FucH

1,2-α-l-fucosidase

GH95

10,816

11

EC 3.2.1.111

α3/4FucH

1,3-α-l-fucosidase

GH29

12

EC 3.2.1.140

LNBase

lacto-N-biosidase

GH20,136

21,568

13

EC 3.2.1.-

β6GlcNAcH

(6-β-N-acetylglucosaminidase)

  1. Glycoside hydrolases included in the Glycologue simulator.
  2. aA sulfatase enzyme (9) and 6-β-N-acetylglucosaminidase (13) are listed but were unused.