Table 1 Differential expression of selected mRNAs involved in proliferation and cell cycle regulation in Reg-2-overexpressing vs control U251-MG cells based on RNAseq analysis.
Category | Gene | Description | ENSEMBL IDENTIFIER | Reg-2 vs ctrl fold change | p-value | FDR p-value |
|---|---|---|---|---|---|---|
CYCLINS | CCNE2 | Essential for the control of the cell cycle at the late G1 and early S phase | ENSG00000175305 | − 2.11 | 0 | 0 |
CCNE1 | Essential for the control of the cell cycle at the G1/S transition | ENSG00000105173 | − 1.43 | 6.19E–06 | 8.74E–05 | |
CCND1 | Regulates the cell-cycle during G1/S transition | ENSG00000110092 | − 1.87 | 0 | 0 | |
CCND3 | Regulates the cell-cycle during G1/S transition | ENSG00000112576 | − 1.31 | 1.61E–04 | 1.61E–03 | |
CCNB1 | Essential for the control of the cell cycle at the G2/M transition | ENSG00000134057 | − 1.21 | 7.40E–03 | 0.05 | |
CCNB2 | Essential for the control of the cell cycle at the G2/M transition | ENSG00000157456 | − 1.21 | 7.12E–03 | 0.04 | |
CCNA2 | Controls both the G1/S and the G2/M transition phases of the cell cycle | ENSG00000145386 | − 1.26 | 9.99E–04 | 8.13–03 | |
CCNG2 | Negative regulation of cell cycle progression | ENSG00000138764 | − 1.3 | 4.36E–04 | 3.94E–03 | |
KINASES | CDKN2D | Inhibition of CDK4 and CDK6 | ENSG00000129355 | − 1.6 | 4.31E–10 | 1.26E–08 |
CDK6 | Serine/threonine kinase involved in the control of the cell cycle; promotes G1/S transition | ENSG00000105810 | − 1.48 | 1.88E–08 | 4.28E–07 | |
CDK2 | Serine/threonine kinase involved in the control of the cell cycle; Acts at the G1/S transition and modulates G2 progression | ENSG00000123374 | − 1.42 | 1.60E–13 | 7.23E–12 | |
CDK11B | Plays multiple roles in cell cycle progression, cytokinesis and apoptosis | ENSG00000248333 | − 1.21 | 0.01 | 0.06 | |
AURKB | Serine/threonine kinase, component of the chromosomal passenger complex (CPC) that acts as a key regulator of mitosis | ENSG00000178999 | − 1.2 | 0.01 | 0.07 | |
AURKA | Mitotic serine/threonine kinase that contributes to the regulation of cell cycle progression | ENSG00000087586 | − 1.18 | 0.02 | 0.09 | |
CDK7 | Serine/threonine kinase involved in cell cycle control and in RNA polymerase II-mediated RNA transcription | ENSG00000134058 | 1.28 | 6.39E–04 | 5.53E–03 | |
CDK1 | Catalytic subunit of the kinase complex known as M-phase promoting factor (MPF), which is essential for G1/S and G2/M phase transitions of cell cycle | ENSG00000185324 | − 1.03 | 0.66 | 0.82 | |
PLK1 | Critical regulator of cell cycle progression, mitosis, cytokinesis, and the DNA damage response | ENSG00000166851 | − 1.37 | 1.81E–05 | 2.28E–04 | |
Cell division control proteins | CDC6 | Participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated | ENSG00000094804 | − 1.66 | 1.24E–12 | 4.98E–11 |
CDC14B | Dual-specificity phosphatase involved in DNA damage response. Essential regulator of the G2 DNA damage checkpoint | ENSG00000081377 | − 1.45 | 1.29E–06 | 2.12E–05 | |
CDC25A | Required for progression from G1 to the S phase of the cell cycle | ENSG00000164045 | − 1.4 | 3.04E–06 | 4.58E–05 | |
CDC20 | Regulatory protein interacting with several other proteins at multiple points in the cell cycle | ENSG00000117399 | − 1.37 | 9.13E–06 | 1.24E–04 | |
CDC25B | Phosphatase that activates the cyclin dependent kinase CDC2; required for entry into mitosis | ENSG00000101224 | − 1.23 | 2.47E–05 | 3.02E–04 | |
CDC27 | Component of the anaphase promoting complex/cyclosome (APC/C), that controls progression through mitosis and the G1 phase of the cell cycle | ENSG00000004897 | − 1.2 | 9.44E–03 | 0,056,301 | |
CDCA8 | Component of the chromosomal passenger complex that is an essential regulator of mitosis and cell division | ENSG00000134690 | − 1.17 | 0,025,054 | 0,12,479 | |
CDC23 | Essential for cell cycle progression through the G2/M transition | ENSG00000094880 | − 1.17 | 1.65E–03 | 0,012,551 | |
CDC45 | Required for initiation of chromosomal DNA replication | ENSG00000093009 | − 1.11 | 0,138,836 | 0,415,178 | |
CDC14A | Dual-specificity phosphatase; required for centrosome separation and cytokinesis during cell division | ENSG00000079335 | 1.19 | 0,046,695 | 0,200,883 | |
CDC7 | Kinase that phosphorylates critical substrates regulating the G1/S phase transition and initiation of DNA replication | ENSG00000097046 | 1.25 | 6.56E–06 | 9.19E–05 | |
CDC26 | Component of the anaphase promoting complex/cyclosome (APC/C), that controls progression through mitosis and the G1 phase of the cell cycle | ENSG00000176386 | 1.3 | 2.66E–04 | 2.53E–03 |