Figure 2 | Scientific Reports

Figure 2

From: Genotype F of Echovirus 25 with multiple recombination pattern have been persistently and extensively circulating in Chinese mainland

Figure 2

(A)The maximum clade credibility (MCC) phylogenetic tree was generated using the Markov chain Monte Carlo (MCMC) method based on 110 complete VP1 sequences of E25. The color of the branches represents the isolates of different genotypes. (B) Bayesian skyline plot of the whole E25 VP1 region sequence, reflecting the relative genetic diversity of E25 from 1957 to 2018. The X-axis is the time scale (year), and the Y-axis is the effective population size; the solid line is the estimated median, and the blue shadow is the 95% highest posterior density. (C) Bayesian skyline plot of theVP1 region sequence of E25 Genotype F.

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