Table 2 The physicochemical prediction score for each residue of B cell epitopes from Sal k 1 allergen.

From: Designing a T-cell epitope-based vaccine using in silico approaches against the Sal k 1 allergen of Salsola kali plant

No

B cell epitope

Emini surface accessibility score (threshold = 1.000)

Parker hydrophilicity score (threshold = 1.835)

Karplus and Schulz flexibility score (threshold = 1.003)

Chou and Fashman beta turn score (threshold = 0.99)

Kolaskar and Tongaonkar antigenicity score (threshold = 1.024)

1

G

0.513

0.88

1.005

0.896

1.036

A

1.000

1.243

0.994

0.976

1.06

V

1.002

2.029

1.004

0.961

1.102

K

0.931

2.1

1.019

1.026

1.101

P

1.011

2.4

1.033

0.909

1.098

V

2.125

2.957

1.048

0.954

1.091

S

2.125

4.3

1.068

1.027

1.026

E

1.36

4.3

1.081

1.106

1.018

Q

1.511

2.686

1.084

0.973

1.045

K

1.953

4.329

1.075

1.007

0.969

G

1.744

3.7

1.056

1.02

0.976

L

1.349

3.514

1.038

1.119

0.999

E

0.501

2.129

1.026

1.05

1.052

P

0.376

0.786

1.014

0.977

1.117

S

0.789

0.829

0.995

0.894

1.137

5

V

1.545

4.357

1.014

1.046

1.024

K

0.915

4.243

1.03

1.064

1.005

P

0.953

1.386

1.035

0.993

1.008

E

1.72

2.014

1.041

1.103

1.001

G

1.436

3.971

1.034

1.24

0.927

W

1.494

4.157

1.025

1.319

0.905

S

1.387

4.857

1.037

1.324

0.864

D

2.803

4.557

1.053

1.363

0.875

N

4.122

4.043

1.076

1.357

0.902

N

3.108

5.771

1.083

1.314

0.927

K

1.88

5.143

1.068

1.204

0.934

P

2.025

4.571

1.045

1.136

1.032

A

2.518

4.386

1.021

1.057

1.030

A

1.817

4.129

1.013

0.971

1.097

Q

0.824

2.171

1.012

0.894

1.028

6

A

0.785

4.257

0.978

1.076

0.989

A

1.553

4.557

0.992

0.994

0.962

D

1.141

3.214

1.015

0.843

1.035

K

1.747

3.214

1.025

0.966

1.035

R

2.709

2.643

1.018

1.034

1.049

V

2.342

3.086

1.003

1.077

1.027

P

2.342

2.471

0.994

1.013

1.036

Y

2.070

2.514

1.002

1.009

1.048

T

2.300

0.901

1.015

0.957

1.102

K

2.147

1.871

1.028

1.023

1.034

Q

2.373

2.686

1.031

0.911

1.004