Table 1 Overlap between SnpEff and Ensembl-VEP predicted variant impact. The variants included in the predicted genetic burden analysis are highlighted in bold.

From: Predicted genetic burden and frequency of phenotype-associated variants in the horse

SnpEff Impact

High

25,550

336

392

Moderate

58

179,480

2,000

Low

176

4

358,514

 

High

Moderate

Low

Ensembl-VEP impact