Table 1 Alignments between the PPGs and phage genomes of reference datasets. The PPGs were aligned by Average Nucleotide Identity (ANI/ FastANI) and Average Aminoacid Identity (AAI/ CompareM) using four different databases. Gray-shaded rows present results of ANI alignments and unshaded rows show results of AAI alignments.
Datasets | # aligned PPGs | # aligned distinct PPGs (%) | # distinct subject sequence that were aligned |
|---|---|---|---|
NCBI Virus RefSeq | 38 | 9 (0.52%) | 37 |
179 | 52 (3.03%) | 159 | |
IMG/ VR | 280 | 56 (3.26%) | 224 |
4715 | 292 (17.03%) | 1902 | |
MillardDB | 259 | 23 (1.34%) | 232 |
951 | 105 (6.12%) | 813 | |
NCBI GenBank | 13 | 6 (0.35%) | 12 |
128 | 72 (3.26%) | 105 | |
Total | 590 | 77 (4.50%) | 505 |
5973 | 348 (20.30%) | 2979 |