Table 2 Putative prophages in the PPGs and their lifestyles as predicted by CheckV and VIBRANT. The lifestyle classification was carried out as described in the Methods Section. (*) VIBRANT did not classify 114 PPGs, while the other tools classified all PPGs.

From: Discovery and description of novel phage genomes from urban microbiomes sampled by the MetaSUB consortium

 

CheckV

VIBRANT *

Bacphlip

Prophage

55%

44%

–

Unique

12%

0.9%

–

Intersection

42%

–

 

Lifestyles

Temperate

69%

68.6%

Lytic

31%

31.4%

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