Figure 4
Circular genome map of NEEL19 (inner most dual counter-current blue rings) showing genome features, labelled genes of interest, and BLAST comparison results. The BLAST searches were conducted using CDS translations from NEEL19, which were compared to each translated comparison genome DNA sequence using tblastn and an E-value cutoff of 0.0001 (a). From the outermost ring to the innermost ring: BLAST results for 28 comparison genomes, NEEL19 genes on the forward strand, NEEL19 genes on the reverse strand. NEEL19 alcohol dehydrogenase genes and genes predicted to be involved in tryptophan formation, indole-3-acetic acid formation, and dopamine formation are labeled. The map was generated using Proksee (66, 67). The NCBI Genome Assembly accessions for the sequences used in the BLAST comparisons are as follows (ordered from the outside to the center): GCF_000026105.1, GCF_000621225.1, GCF_000730665.1, GCF_000425785.1, GCF_000730645.1, GCF_900277125.1, GCF_000730605.1, GCF_009932335.1, GCF_000190455.2, GCF_000710785.1, GCF_001753875.1, GCF_001320385.1, GCF_004350515.1, GCF_002927165.1, GCF_003935475.1, GCF_001320435.1, GCF_001753895.1, GCF_001645635.1, GCF_001321005.1, GCF_001753935.1, GCF_007633355.1, GCF_008605605.1, GCF_900455605.1, GCF_009668315.1, GCF_003936655.1, GCF_001320345.1, GCF_009932375.1, GCF_003205245.1. Enlarged view of the plot showing the heterogeneous distribution of putative iaaH in tested Pseudomonas (b).
