Table 2 Subset of gene annotations for robust climate outliers detected using GEA analyses on six American pika (Ochotona princeps) lineages.
Gene ID | CNV | Variable associations | Lineages |
|---|---|---|---|
CHCHD3 | NC_050563.1_30967720_2611485 | Radiation | CSC |
NC_050563.1_31126318_2611814 | Temperature | NRM | |
NC_050563.1_31126337_2611814 | Temperature, precipitation, radiation | NRM, CU | |
NC_050563.1_31126355_2611814 | Temperature, precipitation, radiation | NRM, CU | |
NC_050563.1_31126371_2611814 | Precipitation, radiation | CU | |
NC_050563.1_31126379_2611814 | Precipitation, radiation | CU | |
DOCK1 | NC_050553.1_3509915_140166 | Precipitation | SRM |
NC_050553.1_3651078_140637 | Precipitation, radiation | SN | |
FBXL7 | NC_050546.1_30893897_950917 | Temperature | CSC |
NC_050546.1_31094969_951406 | Temperature | SN | |
NC_050568.1_2668793_3906688 | Temperature | CU | |
NC_050568.1_2668814_3906688 | Temperature | CU | |
HPSE2 | NC_050553.1_25946746_201125 | Precipitation | SN |
NC_050553.1_26022614_201248 | Temperature | NRM | |
HUS1 | NC_050545.1_42800208_3781296 | Temperature, precipitation | SRM |
LOC101517538 (VMN2R116) | NC_050553.1_69408172_305279 | Temperature | NRM |
NC_050553.1_69408231_305279 | Temperature | NRM | |
LOC101529014 (TRRAP) | NC_050548.1_133443909_2930290 | Radiation | CU |
NC_050548.1_133443965_2930289 | Radiation | CU | |
NC_050548.1_133596957_2931039 | Precipitation | CU | |
NC_050548.1_133596959_2931039 | Precipitation | CU | |
NC_050548.1_37778753_2726048 | Radiation | CU | |
NC_050548.1_37779077_2726047 | Radiation | CU | |
NC_050548.1_37779097_2726047 | Radiation | CU | |
NC_050536.1_13032794_1943468 | Temperature | CRM | |
NC_050536.1_13033154_1943468 | Temperature, radiation | CRM | |
NC_050541.1_35683184_4832659 | Precipitation | SN | |
NC_050541.1_35703827_4832693 | Radiation | CU | |
NC_050541.1_35703843_4832693 | Radiation | CU | |
NC_050541.1_35703860_4832693 | Radiation | CU | |
NC_050541.1_35704145_4832693 | Radiation | CU | |
NC_050541.1_35704147_4832693 | Radiation | CU | |
NC_050541.1_35704162_4832693 | Radiation | CU | |
NC_050541.1_35704225_4832693 | Radiation | CU | |
NC_050542.1_9477885_1402332 | Precipitation | NRM | |
NC_050542.1_9477910_1402332 | Precipitation | NRM | |
LOC101532007 (OLFR147) | NC_050536.1_13032794_1943468 | Temperature | CRM |
NC_050536.1_13033154_1943468 | Temperature, radiation | CRM | |
MACROD1 | NC_050536.1_108586515_2151246 | Temperature, precipitation | CSC |
MCU | NC_050553.1_37066530_231578 | Temperature, precipitation, radiation | SN |
MED12L | NC_050549.1_14187010_4510924 | Temperature | SN |
NC_050549.1_14187037_4510924 | Temperature | SN | |
NC_050549.1_14206971_4511008 | Temperature | NRM | |
NC_050539.1_2811551_2405314 | Temperature | CSC | |
NC_050539.1_2811556_2405314 | Temperature | CSC | |
ONECUT1 | NC_050552.1_65357252_2319361 | Precipitation, radiation | CU |
