Table 1 Comparison of genome assembly and quality assessment for Asian king vulture using PacBio and MGI hybrid sequencing with Purged analysis (PacBio-MGI-Purged) versus Nanopore and MGI hybrid sequencing (Nanopore-MGI).
PacBio-MGI-Purged | Nanopore-MGI | |
|---|---|---|
N50 contig/scaffold size (bases) | 28,731,705 | 8,220,899 |
L50 contig/scaffold number | 16 | N/A |
Assembly size (bases) | 1,288,247,345 | 1,223,963,004 |
Number of contigs/scaffolds | 261 | 1001 |
Number of contigs/scaffolds ≥ 1 Kbp | 116 | N/A |
Number of contigs/scaffolds ≥ 10 Kbp | 84 | N/A |
Number of contigs/scaffolds ≥ 10 Mbp | 38 | N/A |
Longest contig/scaffold (bases) | 81,203,610 | 35,362,384 |
Number of Ns | 0 | N/A |
GC content (%) | 42.92 | N/A |
BUSCO evaluation (% completeness) | 97.4 | 97 |