Table 6 RPA probes for UCBSV and CBSV, 1 = dT-FAM; 2 = BHQ2-dT; Z = THF.

From: Real-time reverse transcription recombinase polymerase amplification (RT-RPA) assay for detection of cassava brown streak viruses

Probe name

Sequence (5ʹ–3ʹ)

UCBSV-RPA-probe

AYGTTGATTTATCAACTAATCAYAAAGT1GZ2ATACAYACRCTTGA-Spacer C3

CBSV-RPA-probe

GARAGGAAGAATGAGAAATCGTGGAGAGC1Z2TGAGYTAAATGCRCA-Spacer C3

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