Table 4 Analysis of the E12 genome function.

Gene Ontology (GO)⁴⁶

A classification system for predicting gene function

Kyoto Encyclopedia of Genes and Genomes (KEGG)⁴⁷

Analysis of gene product metabolic pathways in cells

Cluster of Orthologous Groups of proteins (COG)⁴⁸

Phylogenetic relationship classification of encoded proteins was constructed

Non-Redundant Protein Database (NR)⁴⁹

Annotate species information, count the number of genes

Transporter Classification Database (TCDB)⁵⁰

Classification of membrane transporter proteins

Swiss-Prot⁵¹

Annotate protein structural domain functions

Carbohydrate Active Enzymes Database (CAZy)⁵²

Carbohydrate-active enzymes are classified into the corresponding protein families

SignalP⁵³

Predicted secreted proteins of encoded genes

TMHMM⁵³

EffectiveT3⁵⁴

Predicted secretory system effector protein

antiSMASH⁵⁵

Prediction of secondary metabolites

Antibiotic Resistance Genes Database (ARDB)⁵⁶

Annotation of drug-resistant gene functions

Comprehensive Antibiotic Research Database (CARD)⁵⁷

Virulence Factors of Pathogenic Bacteria (VFDB)⁵⁸

Note the function of the virulence gene

Circos⁵⁹

Demonstration of the genome